Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01939 ATGGTGGCTTTTGGCGGGAAAAAGTTGCGGCAAATGGTTTCAGGCTTGGGCGGTAACAGTCTCGGCCAGGTCCTTGCCGCTGTGGCAGTGACCGTCCTTGTCCGCCTCTTCTCTGGTCCTGGTCCTGTACTCCCCCCAGAAGCCGAGAATGAGGACCACGGCGATGGGGAGGAGAAGGATGACGCTGATGAGAGTGGAGGTCCTGTTTCCGGTAAAGTTTTTCCGGTCTCAATCCGATGGCGCAACATCTCCTGCTCTCTTTCTGATAAATCCTCCAAGTCTGTGAGATTTTTGCTCCAAAATGTGGGTGGAGAAGCAAAGCCTGGAAGGTTATTAGCTATAATGGGCCCGTCGGGTTCTGGAAAAACTACATTACTCAATGTTCTTGCGGGTCAGCTAGCAGCATCTCCCCGGCTGCATCTGTCAGGCCTTTTGGAGTTCAATGGCAAGCCTAGCTCAAAGAGAAGTTATAAGTTTGCTTATGTAAGACAGGAGGATCTGCTTTTCTCACAGCTCACAGTGAGAGAGACATTGTCCCTTGCTACAGAACTGCAGCTGCCTGGCATATCTTCCGTCGAAGAGAGGGATGAATATGTGAAAAATCTCTTGTTCAAACTAGGATTGGTCAGCTGTGCTGATACCATTGTTGGTGATGCAAAAGTTCGGGGAATTAGTGGTGGTGAAAAGAAACGCTTATCTTTGGCATGTGAACTTCTTGCAAGCCCGTCTGTTATATTTGCTGATGAACCGACTACTGGACTCGATGCCTTTCAGGCTGAGAAAGTGGTGGAAACTCTCCAACAACTTGCACAAGAGGGTCATACAGTAATTTGCTCTATTCACCAGCCAAGAGGTTCAGTGTATAATAAATTTGATGACATTGTCTTGCTAACTGAGGGTTCACTCGTTTATTCTGGTCCTGCTCGTGATGAACCATTGGCATACTTCTCAAAATTTGGGTATCATTGCCCTGCTCATATAAATCCTGCTGAATTTCTGGCTGATCTAATATCCATCGACTACAGTTCTGCTGAAAGTGTTTATTCCTCTCAAAAGAGAATTGATAGTCTTGTTGAGTCATTCTCTGAAAGACTTTCTCCAATACTTTATGCAACTCCAACTACCAAAGAAGTGCTACACAAAAATGGAAAGAAAGTTGGGATGAGAACTGTAGCTAAGAAGAAAGGAGGTTGGTGGAAACAATTCTGGTTGCTCCTCAGGCGGGCATGGATGCAGGCTTCCCGTGATGGACCAACAAACAAAGTTCGAGCAAGGATGTCAATCGCATCAGCAGTTATTTTTGGTTCAGTGTTCTGGAGAATGGGAAGATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCTATGGCTGCTCTTACAAAGACTGTTGGAGTGTTTCCGAAAGAGCGTGCAATTGTGGATAAAGAACGTGCAAAAGGCTCCTATTTGTTGGGTCCTTATCTGTTCTCAAAATTGCTGGCTGAGATTCCTATCGGAGCAGCTTTTCCACTGATGTTTGGTGCTGTTTTGTACCCAATGGCCCGTCTTCATCCTACTTTACTGAGATTTGGGAAATTCTGTGGGATAGTCACTGTGGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTTGGAGCTATGGTTCCAACCACTGAAGCAGCCATGGCAGTTGGCCCCTCTCTTATGACTGTTTTTATTGTATTTGGAGGCTATTATGTCAATCCTGAAAATACTCCAATCGTCTTCCGCTGGATTCCTCGTGTTTCTCTCATTAGATGGGCCTTTCAAGGACTCTGCATCAATGAATTTAGTGGTCTTGAATTTGAACATCAGAACCCATTTGATGTTCAAACAGGAGAACAGGCACTGGAGCGCATATCTTTTGGAGGAAGCAAAATTAGGGATACAGTGGTTGCACAAAGTAAGATAATGTTATTTTGGTACTGCACCACCTACCTTCTCCTTGAGAAGAACAAGCCAAAGTACCAGCAACTTGAGCCACCACCTGTACTCAAATTGCATTCAAAACTTGAGGAGATTAATCCTGAACAAGATAATCAGCCACAACCCCTTGAAGATCAACCAGTGAATGAGGTTGATGGATCAAATCAATCTGATCCTGTTGGATCTTTCATCCTAGAAGGTGCTGAGTAA 2178 0.4495 MVAFGGKKLRQMVSGLGGNSLGQVLAAVAVTVLVRLFSGPGPVLPPEAENEDHGDGEEKDDADESGGPVSGKVFPVSIRWRNISCSLSDKSSKSVRFLLQNVGGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGKPSSKRSYKFAYVRQEDLLFSQLTVRETLSLATELQLPGISSVEERDEYVKNLLFKLGLVSCADTIVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQQLAQEGHTVICSIHQPRGSVYNKFDDIVLLTEGSLVYSGPARDEPLAYFSKFGYHCPAHINPAEFLADLISIDYSSAESVYSSQKRIDSLVESFSERLSPILYATPTTKEVLHKNGKKVGMRTVAKKKGGWWKQFWLLLRRAWMQASRDGPTNKVRARMSIASAVIFGSVFWRMGRSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDKERAKGSYLLGPYLFSKLLAEIPIGAAFPLMFGAVLYPMARLHPTLLRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIVFRWIPRVSLIRWAFQGLCINEFSGLEFEHQNPFDVQTGEQALERISFGGSKIRDTVVAQSKIMLFWYCTTYLLLEKNKPKYQQLEPPPVLKLHSKLEEINPEQDNQPQPLEDQPVNEVDGSNQSDPVGSFILEGAE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01939 725 MobiDBLite consensus disorder prediction 690 717 - -
Accr9g01939 725 CDD ABCG_EPDR 75 306 - -
Accr9g01939 725 MobiDBLite consensus disorder prediction 43 73 - -
Accr9g01939 725 FunFam ABC transporter G family member 7 76 314 - -
Accr9g01939 725 Pfam ABC-2 type transporter 281 338 IPR043926 GO:0140359
Accr9g01939 725 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 64 629 - -
Accr9g01939 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 310 IPR027417 -
Accr9g01939 725 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Accr9g01939 725 SMART AAA_5 108 301 IPR003593 GO:0016887
Accr9g01939 725 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524|GO:0016887
Accr9g01939 725 Pfam ABC-2 type transporter 401 611 IPR013525 GO:0016020|GO:0140359
Accr9g01939 725 Gene3D - 75 313 IPR027417 -
Accr9g01939 725 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 324 IPR003439 GO:0005524
Accr9g01939 725 MobiDBLite consensus disorder prediction 681 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01939 Accr-Chr9 42084363 42089934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01939 98 306 Calmodulin-binding Proteins AT2G36910 27.982 2.88e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01939 K05681 - gmx:100788256 1148.65