Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01899 ATGGAGGCGCCTCCTCCTCCGCTCACTGCTCCGCCTCTCGCCGCCGCTGTCACGCCGACGATGCCACCCTCTCATCTCAATTACCCTGACTCTGTTGATTCTTCTCCTCGTTCCCGCAACGCCGACTCCTGGGATGACCCTTTCCCTCCCGCCGCTGCCTCCACCAAGCTCCGCCTCATGTGCAGCTACGGCGGTCACATCGTTCCTCGCCCTCACGACAAGTCTCTTTGTTACGTCGGTGGCGATACTCGTATTGTTGTCGTTGACCGGAACACCTCTCTCTCCGACTTGTCTTCGCGCCTCTCTAAAACCTTCCTTGATGGCCGTCCCTTCACTCTCAAATACCAGCTTCCTAGTGAAGACCTCGATTCCTTAATTTCTGTCACCACTGATGAAGATTTTGATAATATGATCGATGAGTATGATCGAACTGCTTCGAATTCGTCGGTTAAGCCCGCCAGAATCCGCTTCTTCTTGTTCCCGACGATGCCTGAATCGTCTCAGTCGATTGGGCCTATACTTGATAATTCAGCTAAATCGGATGACTGGTTCCTAAACGCGCTAAACGGCACAGCAGTGCTCAACAGAGAGTTTTCTGAGTCCGGTTCTGTAAATTGCTTGCTGGGTCTCGATGATGAGGTTGGTGGGAATAACCTGGACTCGGTTTCTAGGGAAAATGAAGTTGCTCAACAATCTGGATCTTTCGGTAATGGCAAGAATATGACGAAGCAAGGCCAGGATGTTCACTCTGTGACTGATTCCCCTATGCTGGAAACGACCTCGTCTTTTGGGTCTACTTCTTCGTCACCTTCGCTGGCGAATTTGCCGCCGATTCGGGTTCATGTCGTGGATGATAGTAGTGTTAGGATGCAAGATCAGAAGGCAGTCGGAATTGAGGATCAATTTGCTCAAATGGGTCTTAGTGGTGGCGGTGGTCAGAGGCCAGATGAAGGGTTTGTCATTCTGTCTTCTCCTCCTCCGATGCCGGCGAGCATCGCAGCCCCGGTGGCTGTGCCGATTAGCTCCGCCGTTGTTTCTGCTGGGGATTACCAGAATCGGGTTTTCGCCGACGATGAGAGAACAGACCACGGAGTGCCTGTGGGTTACAGAAAACCGACGACACAGCAGCCACAACCACAGTCTCAGGCCCAGCCTCAAAATCTGCCTCCTCAATTTCAACAGAAGTCAGCCGGCGTTGTTGATTTGCCTTCGCCAGATTCAGTTTCAAGTGATGGTAGTGTTTCAAATCCATTGTCACGCCCAAAGCCTGTAATCTATCAAGAACAAGTTCAAATTCCCACTGCGACTACAAGGTTTCCTAGTAATCCTGCTGATCCAGTAAAGCTTAATATGTCTGATCCTCACGCTCGGATCCAGATGCAGCAACAGTTGCAGGACCCTGGGTATGTATTGCAACCACAATTTGATCCGCAGCAACAACCTCAACAGCAGCAGAAGCAGCAATACATACCAAATTCCCATTTCATTCACCATACTCCTGCCGGAGCCATGCAGATCCCAGCATATTATCCTGTATATCCTTCCCAGCAACAATCTCACCCTCAGCATCACCCTCAGCTCGATCAGCAATACCCAGTTTACTACATGCCGGCAAGGCAGGCACAGCCTTACAACTTATCGATGCAGCAGCAGCAGCAGCAACAACAACAACAACCTAATATTGGTGAAACCAACATGGCCATTCCTTCTAGCCGACCCCAAGCTCAGCCAAATCCGACCATGGCTCCATCATCCGCAGCTTACAATCCTGTAAGAAATGTTCCCATTCCGAAGGCTGAAATGGCTGCTGGCGCATACAGAACAAGTGCAGGCATCCCCCAATTAGTTCAAGTCCCTTCTGGTCAGCCTCAGCATCAGCAACAATTCGTTGCTTACTCTCAAATTCATCATCCCTCTCAGACTGCTGCCCCTAATTCTGCTGCCCCGGCAAATTATGCAGCTTATGACTATGCCGATCCGGCTCATGCTCAGATATACTACACCCAACATTTGGCTCCTACCATGCCTTCACAGTACCAGACTATTGCAGCTCCACCTGTTGTGCTGCCAGAAGTTTCTTCTCAGCTTCCTTCTGATAGCATGAAGCAGCAGATAAGAACCTCACAGCCAATATAA 2136 0.5042 MEAPPPPLTAPPLAAAVTPTMPPSHLNYPDSVDSSPRSRNADSWDDPFPPAAASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVDRNTSLSDLSSRLSKTFLDGRPFTLKYQLPSEDLDSLISVTTDEDFDNMIDEYDRTASNSSVKPARIRFFLFPTMPESSQSIGPILDNSAKSDDWFLNALNGTAVLNREFSESGSVNCLLGLDDEVGGNNLDSVSRENEVAQQSGSFGNGKNMTKQGQDVHSVTDSPMLETTSSFGSTSSSPSLANLPPIRVHVVDDSSVRMQDQKAVGIEDQFAQMGLSGGGGQRPDEGFVILSSPPPMPASIAAPVAVPISSAVVSAGDYQNRVFADDERTDHGVPVGYRKPTTQQPQPQSQAQPQNLPPQFQQKSAGVVDLPSPDSVSSDGSVSNPLSRPKPVIYQEQVQIPTATTRFPSNPADPVKLNMSDPHARIQMQQQLQDPGYVLQPQFDPQQQPQQQQKQQYIPNSHFIHHTPAGAMQIPAYYPVYPSQQQSHPQHHPQLDQQYPVYYMPARQAQPYNLSMQQQQQQQQQQPNIGETNMAIPSSRPQAQPNPTMAPSSAAYNPVRNVPIPKAEMAAGAYRTSAGIPQLVQVPSGQPQHQQQFVAYSQIHHPSQTAAPNSAAPANYAAYDYADPAHAQIYYTQHLAPTMPSQYQTIAAPPVVLPEVSSQLPSDSMKQQIRTSQPI 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01899 711 SMART PB1_new 71 162 IPR000270 GO:0005515
Accr9g01899 711 MobiDBLite consensus disorder prediction 224 249 - -
Accr9g01899 711 CDD PB1_UP2 60 160 - -
Accr9g01899 711 MobiDBLite consensus disorder prediction 432 451 - -
Accr9g01899 711 PANTHER OS05G0427100 PROTEIN-RELATED 27 556 - -
Accr9g01899 711 MobiDBLite consensus disorder prediction 354 425 - -
Accr9g01899 711 Gene3D - 76 159 - -
Accr9g01899 711 ProSiteProfiles PB1 domain profile. 56 160 IPR000270 GO:0005515
Accr9g01899 711 MobiDBLite consensus disorder prediction 1 48 - -
Accr9g01899 711 Pfam PB1 domain 72 161 IPR000270 GO:0005515
Accr9g01899 711 MobiDBLite consensus disorder prediction 545 586 - -
Accr9g01899 711 MobiDBLite consensus disorder prediction 1 18 - -
Accr9g01899 711 MobiDBLite consensus disorder prediction 406 422 - -
Accr9g01899 711 MobiDBLite consensus disorder prediction 24 38 - -
Accr9g01899 711 MobiDBLite consensus disorder prediction 371 400 - -
Accr9g01899 711 SUPERFAMILY CAD & PB1 domains 72 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01899 Accr-Chr9 41026465 41028766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01899 56 205 MAP Kinase Kinase Kinase AT3G46920 40.523 4.54e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01899 - - qsa:O6P43_025756 822.772