Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01886 ATGAACTCAGCCACCCCCTTCTTCATCCTCGTCTTGTGGGTTCTCATCAGAACCACAACCTGTTATGTGAATCCCAACTTCCAAGCTTGCGAGCCCAAAACCTGTGGAAACGGCCCGAACATAACCTACCCCTTCTATATCCAAGATAAGCAAGACTACTTCTGCGGATTCCCTTTTTTCAGTCTTGTCTGTGCTTCTAATGGCTTCCCCATGCTCAATCTCTCCAATACTTTCTACATCGTCGATGAAATTTTCTACGACAATCAATCTCTTCGAGTTTTCAACCCTAACTTTCCGATATCCAATTCCCCCAATTGTCTCTCTCCCTCCAACAACCTCACTCTCGATGACCGGTATACTGTAGCTCCAAACCAGAAGGAGGTGCGACTGTTCTTCGATTGTGAATTACCGTCGTTGCCGGAGGAGATTAAAGAGAACGTATGGGGGTGTTATGAAGGGAACCGAACGAAGTCGGTGTTGGGTATGGCGGTGGACGATGAAGCGAAGAAGTTGAAGTATGCGAATGATAATTGCCGTGGTGGGCCGATGACGACGGTGGTGGAGAATTTGGAAGGAGGGATCAGAGAGGCTTTGGGAAGAGGCTTCCTGTTGAAGTCTCCGAATTGGACGGCGAGTTATTGCGATAAATGCCAGAGCAGTGGAGGAAGGTGTGGCTTCGTCGTTACTGATGGATTTGGCTTTAGGTGCTTTTGCCCCGACCGCAACCATCGTGAGATATGTCGTTCTGGTGCAGGCAAAGGGGCTTTGAAACTGGGACTGGGATTGGGTTTAGGGATTGGAGTCCCATGGATGATAACAATGGGGATGATTGTGTGGTGTTGGAGGAGAAGAAAATATGGAGATTCAGATTCAATAAACAGATATGGTGGTCATTCCAGCATGGAGGGTAGCAATGTGTACTTTGGAATCCCTGTTTTCTCCTACGCTGAGCTTGAAGCAGCCACCAACAATTTTGACCCTTCCACCGAACTTGGAGATGGAGGCTTTGGCGCTGTTTATTACGGCAAACTAGAAGACGGACGAGAAGTTGCAGTCAAACGCTTATATGAGCAAAACTACAAACAAGTAGAACACTTCATGAATGAAGTGAGGATCCTAACTCGCTTACACCACAAAAACCTTGTCTCCCTCTATGGCTGCACCTCCCGCCACAGCCGTGAACTCATCCTCGTCTATGAATTCATCCCAAATGGCACTGTCGCTCATCACCTCCACCTTCATAGAGATCCCAAAAGGCCCACCGTCCTACCATGGTCCACCCGCATGAAGATCGCTGTCCAAACGGCTAGAGCATTGGTCTACCTCCATGCTTCTGACATCATCCACCGTGACATCAAAACCAACAACATCCTCCTCGACGAAGTATTCAACGTTAAGGTTGCCGATTTTGGACTTTCAAGGTCTTTCCCCACTGATGTCACCCATGTTTCCACTGCTCCTCAGGGGACACCCGGTTATCTTGACCCCGATTATCACCATTGCTACCAGCTCACTAGCAAAAGTGATGTCTATAGTTTTGGAGTTGTGCTTATCGAGCTCATAACATCCATGGCAGCCGTTGACATGAGCCGGGACTCGGACTCTATTAACTTGTCCAGCTTAGCGGTGAGGAAGATTCAGAGGAGCGAGCTGAGCGAGCTGGTGGATCCTTCTCTTGGGTTTGAGAGGGATGGGGAAGTGAAGAGGATGGTGATTTTAGTGTCTCAGTTGGCGTTTCAGTGTTTACAGACTAATAAGGAGTTGAGACCTTCCATGGAGGAAGTTTTGGAGACGTTGGAGAGGATTCAAAGTGGCAGTGACGGGAGTGATCGGATGAAGGAGCCCCCACGGTTGCCGCCGGAATCACCCTGTTGGGATGAGGTTGGGTTGTTGAAGAACACAAATCCACCACCTCGTTCTCCTAACAGCGTTGCTGATAAATGGGGAAGCCAATCCACAACTCCCAACGTTAGTACTTGA 1980 0.4869 MNSATPFFILVLWVLIRTTTCYVNPNFQACEPKTCGNGPNITYPFYIQDKQDYFCGFPFFSLVCASNGFPMLNLSNTFYIVDEIFYDNQSLRVFNPNFPISNSPNCLSPSNNLTLDDRYTVAPNQKEVRLFFDCELPSLPEEIKENVWGCYEGNRTKSVLGMAVDDEAKKLKYANDNCRGGPMTTVVENLEGGIREALGRGFLLKSPNWTASYCDKCQSSGGRCGFVVTDGFGFRCFCPDRNHREICRSGAGKGALKLGLGLGLGIGVPWMITMGMIVWCWRRRKYGDSDSINRYGGHSSMEGSNVYFGIPVFSYAELEAATNNFDPSTELGDGGFGAVYYGKLEDGREVAVKRLYEQNYKQVEHFMNEVRILTRLHHKNLVSLYGCTSRHSRELILVYEFIPNGTVAHHLHLHRDPKRPTVLPWSTRMKIAVQTARALVYLHASDIIHRDIKTNNILLDEVFNVKVADFGLSRSFPTDVTHVSTAPQGTPGYLDPDYHHCYQLTSKSDVYSFGVVLIELITSMAAVDMSRDSDSINLSSLAVRKIQRSELSELVDPSLGFERDGEVKRMVILVSQLAFQCLQTNKELRPSMEEVLETLERIQSGSDGSDRMKEPPRLPPESPCWDEVGLLKNTNPPPRSPNSVADKWGSQSTTPNVST 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01886 659 Pfam Protein tyrosine and serine/threonine kinase 329 599 IPR001245 GO:0004672|GO:0006468
Accr9g01886 659 ProSiteProfiles Protein kinase domain profile. 325 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01886 659 FunFam receptor-like protein kinase FERONIA 291 401 - -
Accr9g01886 659 MobiDBLite consensus disorder prediction 635 659 - -
Accr9g01886 659 Pfam Wall-associated receptor kinase galacturonan-binding 30 93 IPR025287 GO:0030247
Accr9g01886 659 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Accr9g01886 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Accr9g01886 659 CDD STKc_IRAK 331 602 - -
Accr9g01886 659 FunFam Wall-associated receptor kinase-like 20 402 612 - -
Accr9g01886 659 SUPERFAMILY Protein kinase-like (PK-like) 310 619 IPR011009 -
Accr9g01886 659 Gene3D Phosphorylase Kinase; domain 1 300 401 - -
Accr9g01886 659 Gene3D Transferase(Phosphotransferase) domain 1 402 614 - -
Accr9g01886 659 MobiDBLite consensus disorder prediction 602 659 - -
Accr9g01886 659 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 652 IPR044652 GO:0004672
Accr9g01886 659 SMART serkin_6 325 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01886 659 Pfam Wall-associated receptor kinase C-terminal 153 240 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01886 Accr-Chr9 40763603 40766813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01886 214 658 Receptor kinase-like Gene Family AT1G25390 54.867 1.04e-159 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr9g01886 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01886 - - aip:107643858 721.465