Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01883 ATGGCTTCTTCAGCAGCTTCTGTGTTCCCACTCCTCTTCTTTCTTCACCTGCTACTTGCTTTCTCATCTGGGTATGGTCTTAGAATCCATGAAAACTGTCCCAGCTCGTTTCAGTGCGGAGAACTTGGGACATTTCACTTTCCTTTCACCAAGCCAGAGCTTCAAGACTGTGGATTTATCACAGTTCATGCCTGTGATGATCATCCAAGTTCAAACAAAAGTATTGAATTTCACAAGAATAATGGTACAAAGCTACGGCTTCTAAAAGGCGTAGACAACAAGAACACCATCACAGTCTTGGATGAAGATCTAGACAAGCTTCTGAAATCCAAAAGTTATTGTCAACTTTTCGACACAAACCTAAGTAGTAGTCTTCCTCCAAACTCAGCTTTGGTCTCTTTTCAGATCCTAAATAACAACACTTGGATCAAATGTGGTCACTGCCACAATGTGAGTCCTCCCACTGGTTTTTTCAAACACGTGTGTAGTGACTATGATGTCTATTGGGAAAACTCATCCAGGCTTAAAGGTAACAATAATAATATTAAGAAGCCAAATGGTTCATTCCCTAATTGTTCAGTTCTTGAGCTTCCAAGTACAGACATGTCTCATAGTGCTCATGATCTTCTGTCCTTCTTAACAAGTCGAATTGTTATTCAAGTACGATTGTCTCATGAATGTAACAACTGTTACTATCACTTGGGAGGACAGTGTCTTCTTGACGCCAACAATGAGTTTTACTGCAAATCTGCAGAGGACACAAGTAAGGGCTACATGCTGGGATTTGGGCTTGGAACAGGAGGATTATTTATTGTACTTATAGTCATTCTGATAGCTTGTCAGCTACGCCAAAGACATTACAAACAAAAAATTGCATCTTCAAACGTCAAAATTCAACCAACAAACAATAATAAAAGGAATCCATTCTCAAATGCAAACACAGAAAGTTTCAGAACCTACTTGGGGCTGCCCCACTTCTCTTACGAGGAACTTGAGAAAGCCACAGATAATTTTAACCGTTCAAGAGAACTTGGAACTGGTGGCTTTGGCACTGTTTATTATGGAATTCTGCAAGATGGAAGAGAAGTTGCAGTGAAGCATCTTTACGAGCACAATTATCGACGAGTAGAGCAATTCAGAAATGAGGTCAAGATCCTCACTCGCTTGCGCCATAGAAACCTTGTATCTCTCTATGGTTGTACTTCATGTCACAGTCGAGAACTTGTCCTTGTCTACGAATACATTCCAAACGGCACTGTTTACTGTCATCTTCATGGTGAGCTAGCAAAACGTGGTCTACTTCCATGGCCTATAAGAATCAAAATAGCCATAGAAACTGCCACTGCTTTGTCTTACCTCCATGCTTCAGACATTATCCACCGTGACGTCAAAACCAACAACATCCTCTTAGAGAACAACTTTTGTGTTAAGGTTGCAGATTTTGGGCTTTCAAGGTTGTTTCCCGGTGATGTTACCCATGTTTCCACTGCTCCACAAGGAACACCAGGCTATGTGGACCCAGAATATCACCAATGTTACCAGCTTACTAGCAAAAGCGATGTGTATAGTTTTGGTGTTGTGCTTATTGAACTTATATCATCTTTGCTTCCTGTTGATATTACAAGGAATAAAGATGAGATAAACTTGGCGGATCTAGCGTTGAAGAAGATTCAAGAGAGTGCTTTTGGGGAGCTGGTGGATCCGTGTCTGGGGTTTGAGACGGATCGTGAGGTCAGGAGGATGATAATTTCGGTGGCAGAGTTGGCTTTTCAGTGTTTACAGAGGGACAAGGACTTGAGACCATCCATGGATGAGGTTTTGAAGTTTCTGAAGAGAATTGAAAGTGGGAATGAGGAGATTGAGGAAGTGGATGTTCATGATGCTATTGGGATTCCACAAAATGAGGCTACTCATTCTCCATCACCATCTTTATCAGATTGTGATGAACTTGGATTGTCGAGACATACAAAATCTTTGCCTTCCTCTAAACTTGTGACTCACAATAATGAGTCAGCTATAGTTCATGTGAGTGCCTAA 2037 0.4119 MASSAASVFPLLFFLHLLLAFSSGYGLRIHENCPSSFQCGELGTFHFPFTKPELQDCGFITVHACDDHPSSNKSIEFHKNNGTKLRLLKGVDNKNTITVLDEDLDKLLKSKSYCQLFDTNLSSSLPPNSALVSFQILNNNTWIKCGHCHNVSPPTGFFKHVCSDYDVYWENSSRLKGNNNNIKKPNGSFPNCSVLELPSTDMSHSAHDLLSFLTSRIVIQVRLSHECNNCYYHLGGQCLLDANNEFYCKSAEDTSKGYMLGFGLGTGGLFIVLIVILIACQLRQRHYKQKIASSNVKIQPTNNNKRNPFSNANTESFRTYLGLPHFSYEELEKATDNFNRSRELGTGGFGTVYYGILQDGREVAVKHLYEHNYRRVEQFRNEVKILTRLRHRNLVSLYGCTSCHSRELVLVYEYIPNGTVYCHLHGELAKRGLLPWPIRIKIAIETATALSYLHASDIIHRDVKTNNILLENNFCVKVADFGLSRLFPGDVTHVSTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISSLLPVDITRNKDEINLADLALKKIQESAFGELVDPCLGFETDREVRRMIISVAELAFQCLQRDKDLRPSMDEVLKFLKRIESGNEEIEEVDVHDAIGIPQNEATHSPSPSLSDCDELGLSRHTKSLPSSKLVTHNNESAIVHVSA 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01883 678 FunFam receptor-like protein kinase FERONIA 299 414 - -
Accr9g01883 678 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 669 IPR044652 GO:0004672
Accr9g01883 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Accr9g01883 678 SMART serkin_6 338 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01883 678 Gene3D Transferase(Phosphotransferase) domain 1 415 627 - -
Accr9g01883 678 Gene3D Phosphorylase Kinase; domain 1 310 414 - -
Accr9g01883 678 Pfam Protein kinase domain 339 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01883 678 MobiDBLite consensus disorder prediction 632 652 - -
Accr9g01883 678 FunFam Wall-associated receptor kinase-like 20 415 623 - -
Accr9g01883 678 ProSiteProfiles Protein kinase domain profile. 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01883 678 SUPERFAMILY Protein kinase-like (PK-like) 322 615 IPR011009 -
Accr9g01883 678 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01883 Accr-Chr9 40739141 40742411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01883 37 657 Receptor kinase-like Gene Family AT1G25390 45.614 2.79e-158 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr9g01883 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01883 - - gmx:100791822 679.478