Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01882 ATGGCTTCTTCAGCAGCTTCTGTGTTCCCACTCCTCTTCTTTCTTCACCTGCTACTTGCTTTCTCATCTGGGTATGGTCTTAGAATCCATGAAAACTGTCCCAGCTCGTTTCAGTGCGGAGAACTTGGGACATTTCACTTTCCTTTCACCAAGCCAGAGCTTCAAGACTGTGGATTTATCACAGTTCATGCCTGTGATGATCATCCAAGTTCAAACAAAAGTATTGAATTTCACAAGAATAATGGTACAAAGCTACGGCTTCTAAAAGGCGTAGACAACAAGAACACCATCACAGTCTTGGATGAAGATCTAGACAAGCTTCTGAAATCCAAAAGTTATTGTCAACTTTTCGACACAAACCTAAGTAGTAGTCTTCCTCCAAACTCAGCTTTGGTCTCTTTTCAGATCCTAAATAACAACACTTGGATCAAATGTGGTCACTGCCACAATGTGAGTCCTCCCACTGGTTTTTTCAAACACGTGTGTAGTGACTATGATGTCTATTGGGAAAACTCATCCAGGCTTAAAGGTAACAATAATAATATTAAGAAGCCAAATGGTTCATTCCCTAATTGTTCAGTTCTTGAGCTTCCAAGTACAGACATGTCTCATAGTGCTCATGATCTTCTGTCCTTCTTAACAAGTCGAATTGTTATTCAAGTACGATTGTCTCATGAATGTAACAACTGTTACTATCACTTGGGAGGACAGTGTCTTCTTGACGCCAACAATGAGTTTTACTGCAAATCTGAGGACACAAGTAAGGGCTACATGCTGGGATTTGGGCTTGGAACAGGAGGATTATTTATTGTACTTATAGTCATTCTGATAGCTTGTCAGCTACGCCAAAGACATTACAAACAAAAAATTGCATCTTCAAACGTCAAAATTCAACCAACAAACAATAATAAAAGGAATCCATTCTCAAATGCAAACACAGAAAGTTTCAGAACCTACTTGGGGCTGCCCCACTTCTCTTACGAGGAACTTGAGAAAGCCACAGATAATTTTAACCGTTCAAGAGAACTTGGAACTGGTGGCTTTGGCACTGTTTATTATGGAATTCTGCAAGATGGAAGAGAAGTTGCAGTGAAGCATCTTTACGAGCACAATTATCGACGAGTAGAGCAATTCAGAAATGAGGTCAAGATCCTCACTCGCTTGCGCCATAGAAACCTTGTATCTCTCTATGGTTGTACTTCATGTCACAGTCGAGAACTTGTCCTTGTCTACGAATACATTCCAAACGGCACTGTTTACTGTCATCTTCATGGTGAGCTAGCAAAACGTGGTCTACTTCCATGGCCTATAAGAATCAAAATAGCCATAGAAACTGCCACTGCTTTGTCTTACCTCCATGCTTCAGACATTATCCACCGTGACGTCAAAACCAACAACATCCTCTTAGAGAACAACTTTTGTGTTAAGGTTGCAGATTTTGGGCTTTCAAGGTTGTTTCCCGGTGATGTTACCCATGTTTCCACTGCTCCACAAGGAACACCAGGCTATGTGGACCCAGAATATCACCAATGTTACCAGCTTACTAGCAAAAGCGATGTGTATAGTTTTGGTGTTGTGCTTATTGAACTTATATCATCTTTGCTTCCTGTTGATATTACAAGGAATAAAGATGAGATAAACTTGGCGGATCTAGCGTTGAAGAAGATTCAAGAGAGTGCTTTTGGGGAGCTGGTGGATCCGTGTCTGGGGTTTGAGACGGATCGTGAGGTCAGGAGGATGATAATTTCGGTGGCAGAGTTGGCTTTTCAGTGTTTACAGAGGGACAAGGACTTGAGACCATCCATGGATGAGGTTTTGAAGTTTCTGAAGAGAATTGAAAGTGGGAATGAGGAGATTGAGGAAGTGGATGTTCATGATGCTATTGGGATTCCACAAAATGAGGCTACTCATTCTCCATCACCATCTTTATCAGATTGTGATGAACTTGGATTGTCGAGACATACAAAATCTTTGCCTTCCTCTAAACTTGTGACTCACAATAATGAGTCAGCTATAGTTCATGTGAGTGCCTAA 2034 0.4115 MASSAASVFPLLFFLHLLLAFSSGYGLRIHENCPSSFQCGELGTFHFPFTKPELQDCGFITVHACDDHPSSNKSIEFHKNNGTKLRLLKGVDNKNTITVLDEDLDKLLKSKSYCQLFDTNLSSSLPPNSALVSFQILNNNTWIKCGHCHNVSPPTGFFKHVCSDYDVYWENSSRLKGNNNNIKKPNGSFPNCSVLELPSTDMSHSAHDLLSFLTSRIVIQVRLSHECNNCYYHLGGQCLLDANNEFYCKSEDTSKGYMLGFGLGTGGLFIVLIVILIACQLRQRHYKQKIASSNVKIQPTNNNKRNPFSNANTESFRTYLGLPHFSYEELEKATDNFNRSRELGTGGFGTVYYGILQDGREVAVKHLYEHNYRRVEQFRNEVKILTRLRHRNLVSLYGCTSCHSRELVLVYEYIPNGTVYCHLHGELAKRGLLPWPIRIKIAIETATALSYLHASDIIHRDVKTNNILLENNFCVKVADFGLSRLFPGDVTHVSTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISSLLPVDITRNKDEINLADLALKKIQESAFGELVDPCLGFETDREVRRMIISVAELAFQCLQRDKDLRPSMDEVLKFLKRIESGNEEIEEVDVHDAIGIPQNEATHSPSPSLSDCDELGLSRHTKSLPSSKLVTHNNESAIVHVSA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01882 677 SMART serkin_6 337 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01882 677 SUPERFAMILY Protein kinase-like (PK-like) 321 614 IPR011009 -
Accr9g01882 677 Gene3D Transferase(Phosphotransferase) domain 1 414 626 - -
Accr9g01882 677 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Accr9g01882 677 ProSiteProfiles Protein kinase domain profile. 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01882 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Accr9g01882 677 MobiDBLite consensus disorder prediction 631 651 - -
Accr9g01882 677 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 668 IPR044652 GO:0004672
Accr9g01882 677 Pfam Protein kinase domain 338 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01882 677 FunFam receptor-like protein kinase FERONIA 298 413 - -
Accr9g01882 677 Gene3D Phosphorylase Kinase; domain 1 309 413 - -
Accr9g01882 677 FunFam Wall-associated receptor kinase-like 20 414 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01882 Accr-Chr9 40739141 40742411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01882 37 656 Receptor kinase-like Gene Family AT1G25390 45.455 2.50e-157 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr9g01882 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01882 - - gmx:100791822 679.093