Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01881 ATGGCTTCAATTTATTATGTGTTTCGTTTCCTCTTGTTTTTTCACTTTGTAATTGCTCTTCTCTCAGCTGGGTATGGAAATGGGAAGCTCTATGACAAGTGTCCTAAATCTTTTGATTGTGGAAATCTTGGGAGGCTCCGCTTCCCTTTCACCAAGCCGGAATTGCCACATTGTGGCTTCTTCGCTGTACGTGGGTGTGGCGATGATCCATCTTCAAATAAAACGATTCAACTGGACAAAAATGGAAAACCATTGCTGCTTAAAAGGGTGCAGCAGCAGCATAATAAGAGCATCACAGTTTTTGTTGAAGACCATGATGAGCATTTGAAATCTACAACCTGTGAAGTTTATAATCATAATATAGCTCATCGTAGTACTCCGAATCATCCTCCTTTGCTTCCTTTTAACATCAAACCCAATTTAATCCTCTTCACATGCACCAACGAGCCCCACCTGATGACCCCCGATTCCTGTCCTGACTATCATGACTATTATTGTGACCAGTCACAGAGTCATACTCATCCTCCTAACATGGCACAAAGCTCTCTCTCACGTTGTTCGACTCTTCGGCTTCCTTGTAGAGACATGAACTATACTGAAGATCTTGGGTTCTCGTGTGTTAAAATAGATATTGAAGTAGAGTCATCAGTTGACTGTTACAATTGCAACCACAAGGGAGGCCTATGTCTAGTTGACGACCACAATAACTTCTCCTGCGGCATAGAGAAAGACAACAGGTTGCTGAAGTTGGGGTTTGGACTTGGGCTAGGAGGTTTAATGATTGTAGTTATAGGCTGTCTAATCATAATTTGGAGGCAGCGAAAGCAACATAACAAACTCAAATATGCATCTTCAAGTGTCCAGTTGCAATCAACAAACAATGGAGGAATTGTTCGTAGCTCTAACACTGATCTTGAAAGTGGCATGGCTTACTTTGGGATCCCCGTCTTCTCTTACGAGGAGCTTGAAAAGGCAACAAATAATTTTGATCATTCAAGAGAAATTGGAAGTGGAGGCTTTGGCACTGTTTATTATGGAGAACTCGGAGATGGACGAGAAGTTGCAGTGAAGAGGCTATATGATCATAATTACAGAGGAATAGAACAGTTCATGAATGAAGTAAATATACAGACCCGCTTGCGCCATAGAAACCTTGTCTCTCTCTATGGCTGCACTTCCCGCCATTGCAGAGAACTTCTCCTTGTCTACGAATACATCCCAAATGGAACCCTTTCATGTCACCTCGACGTCGAGCTAGCCCATCCTTGCTTACTTCCATGGCCTATCAGAATGAAAATAGCCATAGAAACTGCATCAGCTTTAGCTTATCTTCATGCTTCCGACACCATTCACAGAGACGTCAAAACCAACAACATCCTCCTAGACATCAACTTCTGTGTTAAGGTTGCAGATTTCGGGCTTTCGAGGTTGTTTCCCAATGATGTCACCCATGTTTCTACTGCTCCCCAAGGAACACCAGGTTATGTTGACCCAGAATATTACCAGTGTTACCAGCTTACTAGCAAAAGCGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGCTGATATCATCTTTGCCTCCAGTTGATTTCAGAAGGAATAAAGATGAGATAAACTTGGCGAATCTGGCTATAAATAAGATTCAGAAAAGTGCTTTAGGGGAGCTAGTTGATCCTTTTCTAGGGTTTGAGACAGATAGTGAGGTTAGGAGGATGATAGTTTCAGTTGCAGAGTTGGCTTTTCAGTGTTTACAAAGGGACAAGGATTTGAGACCTTCCATGGATGAGGTTTTGGAGATTCTAAAAAGAATTGAGAGCGGAAAGGAGGAACAAAATGGCGTAGAGGAAGTGGATATTAATGGGGTGAATGTGATTTCATACAGTGGCCCAATATCGCCTCCTTCACCAGATCCCGATGAAGCTATATCGTTGAAAGTTACAGAGTCACTGACTCCTGCGCCAGCCACCAAAACTCGTCACACATGA 1986 0.4255 MASIYYVFRFLLFFHFVIALLSAGYGNGKLYDKCPKSFDCGNLGRLRFPFTKPELPHCGFFAVRGCGDDPSSNKTIQLDKNGKPLLLKRVQQQHNKSITVFVEDHDEHLKSTTCEVYNHNIAHRSTPNHPPLLPFNIKPNLILFTCTNEPHLMTPDSCPDYHDYYCDQSQSHTHPPNMAQSSLSRCSTLRLPCRDMNYTEDLGFSCVKIDIEVESSVDCYNCNHKGGLCLVDDHNNFSCGIEKDNRLLKLGFGLGLGGLMIVVIGCLIIIWRQRKQHNKLKYASSSVQLQSTNNGGIVRSSNTDLESGMAYFGIPVFSYEELEKATNNFDHSREIGSGGFGTVYYGELGDGREVAVKRLYDHNYRGIEQFMNEVNIQTRLRHRNLVSLYGCTSRHCRELLLVYEYIPNGTLSCHLDVELAHPCLLPWPIRMKIAIETASALAYLHASDTIHRDVKTNNILLDINFCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLIELISSLPPVDFRRNKDEINLANLAINKIQKSALGELVDPFLGFETDSEVRRMIVSVAELAFQCLQRDKDLRPSMDEVLEILKRIESGKEEQNGVEEVDINGVNVISYSGPISPPSPDPDEAISLKVTESLTPAPATKTRHT 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01881 661 ProSiteProfiles Protein kinase domain profile. 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01881 661 SMART serkin_6 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01881 661 SUPERFAMILY Protein kinase-like (PK-like) 305 601 IPR011009 -
Accr9g01881 661 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 637 IPR044652 GO:0004672
Accr9g01881 661 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Accr9g01881 661 FunFam Wall-associated receptor kinase-like 20 406 614 - -
Accr9g01881 661 Pfam Protein kinase domain 331 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01881 661 MobiDBLite consensus disorder prediction 627 661 - -
Accr9g01881 661 Gene3D Transferase(Phosphotransferase) domain 1 406 618 - -
Accr9g01881 661 Gene3D Phosphorylase Kinase; domain 1 301 405 - -
Accr9g01881 661 FunFam receptor-like protein kinase FERONIA 291 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01881 Accr-Chr9 40734882 40738270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01881 36 645 Receptor kinase-like Gene Family AT1G25390 45.484 2.63e-158 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr9g01881 Pkinase 7.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01881 - - gmx:100791822 633.254