Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01880 ATGGCTTCAATTTATTATGTGTTTCGTTTCCTCTTGTTTTTTCACTTTGTAATTGCTCTTCTCTCAGCTGGGTATGGAAATGGGAAGCTCTATGACAAGTGTCCTAAATCTTTTGATTGTGGAAATCTTGGGAGGCTCCGCTTCCCTTTCACCAAGCCGGAATTGCCACATTGTGGCTTCTTCGCTGTACGTGGGTGTGGCGATGATCCATCTTCAAATAAAACGATTCAACTGGACAAAAATGGAAAACCATTGCTGCTTAAAAGGGTGCAGCAGCAGCATAATAAGAGCATCACAGTTTTTGTTGAAGACCATGATGAGCATTTGAAATCTACAACCTGTGAAGTTTATAATCATAATATAGCTCATCGTAGTACTCCGAATCATCCTCCTTTGCTTCCTTTTAACATCAAACCCAATTTAATCCTCTTCACATGCACCAACGAGCCCCACCTGATGACCCCCGATTCCTGTCCTGACTATCATGACTATTATTGTGACCAGTCACAGAGTCATACTCATCCTCCTAACATGGCACAAAGCTCTCTCTCACGTTGTTCGACTCTTCGGCTTCCTTGTAGAGACATGAACTATACTGAAGATCTTGGGTTCTCGTGTGTTAAAATAGATATTGAAGTAGAGTCATCAGTTGACTGTTACAATTGCAACCACAAGGGAGGCCTATGTCTAGTTGACGACCACAATAACTTCTCCTGCGGCATAGAGAAAGACAACAGGTTGCTGAAGTTGGGGTTTGGACTTGGGCTAGGAGGTTTAATGATTGTAGTTATAGGCTGTCTAATCATAATTTGGAGGCAGCGAAAGCAACATAACAAACTCAAATATGCATCTTCAAGTGTCCAGTTGCAATCAACAAACAATGGAGGAATTGTTCGTAGCTCTAACACTGATCTTGAAAGTGGCATGGCTTACTTTGGGATCCCCGTCTTCTCTTACGAGGAGCTTGAAAAGGCAACAAATAATTTTGATCATTCAAGAGAAATTGGAAGTGGAGGCTTTGGCACTGTTTATTATGGAGAACTCGGAGATGGACGAGAAGTTGCAGTGAAGAGGCTATATGATCATAATTACAGAGGAATAGAACAGTTCATGAATGAAGTAAATATACAGACCCGCTTGCGCCATAGAAACCTTGTCTCTCTCTATGGCTGCACTTCCCGCCATTGCAGAGAACTTCTCCTTGTCTACGAATACATCCCAAATGGAACCCTTTCATGTCACCTCGACGTCGAGCTAGCCCATCCTTGCTTACTTCCATGGCCTATCAGAATGAAAATAGCCATAGAAACTGCATCAGCTTTAGCTTATCTTCATGCTTCCGACACCATTCACAGAGACGTCAAAACCAACAACATCCTCCTAGACATCAACTTCTGTGTTAAGGTTGCAGATTTCGGGCTTTCGAGGTTGTTTCCCAATGATGTCACCCATGTTTCTACTGCTCCCCAAGGAACACCAGTTGATTTCAGAAGGAATAAAGATGAGATAAACTTGGCGAATCTGGCTATAAATAAGATTCAGAAAAGTGCTTTAGGGGAGCTAGTTGATCCTTTTCTAGGGTTTGAGACAGATAGTGAGGTTAGGAGGATGATAGTTTCAGTTGCAGAGTTGGCTTTTCAGTGTTTACAAAGGGACAAGGATTTGAGACCTTCCATGGATGAGGTTTTGGAGATTCTAAAAAGAATTGAGAGCGGAAAGGAGGAACAAAATGGCGTAGAGGAAGTGGATATTAATGGGGTGAATGTGATTTCATACAGTGGCCCAATATCGCCTCCTTCACCAGATCCCGATGAAGCTATATCGTTGAAAGTTACAGAGTCACTGACTCCTGCGCCAGCCACCAAAACTCGTCACACATGA 1881 0.4264 MASIYYVFRFLLFFHFVIALLSAGYGNGKLYDKCPKSFDCGNLGRLRFPFTKPELPHCGFFAVRGCGDDPSSNKTIQLDKNGKPLLLKRVQQQHNKSITVFVEDHDEHLKSTTCEVYNHNIAHRSTPNHPPLLPFNIKPNLILFTCTNEPHLMTPDSCPDYHDYYCDQSQSHTHPPNMAQSSLSRCSTLRLPCRDMNYTEDLGFSCVKIDIEVESSVDCYNCNHKGGLCLVDDHNNFSCGIEKDNRLLKLGFGLGLGGLMIVVIGCLIIIWRQRKQHNKLKYASSSVQLQSTNNGGIVRSSNTDLESGMAYFGIPVFSYEELEKATNNFDHSREIGSGGFGTVYYGELGDGREVAVKRLYDHNYRGIEQFMNEVNIQTRLRHRNLVSLYGCTSRHCRELLLVYEYIPNGTLSCHLDVELAHPCLLPWPIRMKIAIETASALAYLHASDTIHRDVKTNNILLDINFCVKVADFGLSRLFPNDVTHVSTAPQGTPVDFRRNKDEINLANLAINKIQKSALGELVDPFLGFETDSEVRRMIVSVAELAFQCLQRDKDLRPSMDEVLEILKRIESGKEEQNGVEEVDINGVNVISYSGPISPPSPDPDEAISLKVTESLTPAPATKTRHT 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01880 626 Gene3D Transferase(Phosphotransferase) domain 1 406 494 - -
Accr9g01880 626 Pfam Protein tyrosine and serine/threonine kinase 332 495 IPR001245 GO:0004672|GO:0006468
Accr9g01880 626 Gene3D Transferase(Phosphotransferase) domain 1 495 591 - -
Accr9g01880 626 Gene3D Phosphorylase Kinase; domain 1 301 405 - -
Accr9g01880 626 SMART serkin_6 329 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01880 626 ProSiteProfiles Protein kinase domain profile. 329 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01880 626 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Accr9g01880 626 MobiDBLite consensus disorder prediction 592 626 - -
Accr9g01880 626 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 493 IPR044652 GO:0004672
Accr9g01880 626 FunFam receptor-like protein kinase FERONIA 291 405 - -
Accr9g01880 626 SUPERFAMILY Protein kinase-like (PK-like) 305 566 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01880 Accr-Chr9 40734882 40738270 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01880 36 610 Receptor kinase-like Gene Family AT1G25390 40.968 7.23e-129 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr9g01880 PK_Tyr_Ser-Thr 5.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01880 - - gmx:100791822 551.977