Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01879 ATGTCTTCAGTATATGCGTCTCGTTTCCTCTTGTTTTTTCACTTTGTCCTTGTTCTTCTCTCAGTTGGGTATGGAAATGTGGAGCATCATGACAAGTGTCCCACATCGTTTGATTGTGACCAATTTGGGAGCCTGCACTTCCCTTTCACCAAGCCAGAACTTCAACACTGTGGCTTTATCACAGTAAATGGTTGTGATGACCCATCTTCAAATAAAACCATTCAACTGGAGGAGAATGGAAGAACATTGCCTCTTAAAAAATTGGTTCAGCAGGAGAATCTCATCACAGTTCTCGACCAAGTTCTGCGTCCAACCTGTGAAGTTTTCGACAGAAACATGTATTTCCCTCTCTATTCTCCTTTGGCTTCCTTTCATGTCAAACACAACGTAACCACCCTGTTCCGATGCAACCACGACGTTACCCCCAGCCCCCCTGCTGGTTTCATCAATCTTTTCTGTCCTGAATTCAATATCTTTTGTCCCGGCTTAGACTTGCCTCCTCCTTCTCCTCCTATTCTTGATCAGCCACAAACCTCTTTAACTGGTTGCTCCAGTCTTCAGCTTCCCTGTAAGAACCTGACATATACCCCAAATTTTTCACTATTCTCATGCGGTGAAATAGATATTGAAGTGCAATTATTTGATGGTTGTAATGAGTGTTACCACCTCAAGGGAGGCCAATGTCTAGTTGACAACCACAATAACTTCTACTGTGACATAGAGACTGGGAGTGAGCCATTCAACTTGAAGTATAAACTTGGCCTTGCAGGTTTATTTATTGGAGCAATAGGATTTGCAATAATAACTTTGTGTCTACTTGAACAGCATTACAAACAACATTCTTCAAGAGTCCAATTGCAAGCAACAAACAATAATGCAATTGATCCCAACTCTGACACTGATCTACAAAGAGGCAGGTATTTAGGGACCCGCCTCTTCTCTTATGAGGAGCTTGGAAAAGCAACAAATAATTTTGAACGTTCAAGAGAACTTAGGAATGGAGGCCTTAGCTCTGTCTACTACGGAAAACTCCAAGATGGACAAGAAGTTGCAATCAAACGTCTAAATAACAAGAACTATAGACGACTTGAACAGTTTCTAAATGAAGTTGAGATCTTGGCTCGCGTGCGCCATCAAAACCTTGTCTCTCTCTATGGCTGCACCTCCCACCACAGTCGTGAACTTCTCCTTGTTTATGAATATGTTCCAAATAGCACAGTTTCAAGTCATCTTCATGGTGAGCTAGCCAACCTTTGTTTACTACCATGGCATGTAAGAATGAAAGTAGCCATAGAAACTGCAACTGCATTGGCATATCTTCATGCTTCTAATATCATCCACTGTGACATCAAAACCGACAATATTCTCCTAGACAACAATCTCTGTGTTAAGGTTGCAGGTTTTGGACTTTCAAGGTTGTCCCTCATCCATGTCACTCATGTTTCCACTACTCCACAAGGGACCCCTGGCTATATTGACCCAGAATCTAACCAAGGCCGAGAACGAACTTGCAAAAGTGATGTCTATAGCTTTGGGGTTGTACTCATTGAGTTGATATCATCTAAGCCAGCAGTTGATATGAACAGGCCTAAAGAGGAGAAAATTCTGGCAAATCTAGCAATAAAGAAGATTCAGAAAAGCGCAATAAAAGAGCTAGTTGATCCTTCTCTTGGTTTTGAGTCAAGTTATGAGGTTAGGAGGAAAATAGCTTGTGCGGCAGAGTTGGCTTTTCAGTGTTTACAAGGAGACAAGGAATTGAGACCTTCCATGTATGAGGTTCTGGAGATACTAACAAGAATTGAGAGTGGGAAGGAGGAACTCAATTGTCCAGAAGAAGTGAATAATCATGGGGTAACGGGGACTTTGCATAGTGGAACGAAACATTCACCACCTCCTCCTTCACCAGACAACGATGAGGCTATATTGTTGAAAAATATTTAA 1941 0.4178 MSSVYASRFLLFFHFVLVLLSVGYGNVEHHDKCPTSFDCDQFGSLHFPFTKPELQHCGFITVNGCDDPSSNKTIQLEENGRTLPLKKLVQQENLITVLDQVLRPTCEVFDRNMYFPLYSPLASFHVKHNVTTLFRCNHDVTPSPPAGFINLFCPEFNIFCPGLDLPPPSPPILDQPQTSLTGCSSLQLPCKNLTYTPNFSLFSCGEIDIEVQLFDGCNECYHLKGGQCLVDNHNNFYCDIETGSEPFNLKYKLGLAGLFIGAIGFAIITLCLLEQHYKQHSSRVQLQATNNNAIDPNSDTDLQRGRYLGTRLFSYEELGKATNNFERSRELRNGGLSSVYYGKLQDGQEVAIKRLNNKNYRRLEQFLNEVEILARVRHQNLVSLYGCTSHHSRELLLVYEYVPNSTVSSHLHGELANLCLLPWHVRMKVAIETATALAYLHASNIIHCDIKTDNILLDNNLCVKVAGFGLSRLSLIHVTHVSTTPQGTPGYIDPESNQGRERTCKSDVYSFGVVLIELISSKPAVDMNRPKEEKILANLAIKKIQKSAIKELVDPSLGFESSYEVRRKIACAAELAFQCLQGDKELRPSMYEVLEILTRIESGKEELNCPEEVNNHGVTGTLHSGTKHSPPPPSPDNDEAILLKNI 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01879 646 SUPERFAMILY Protein kinase-like (PK-like) 303 597 IPR011009 -
Accr9g01879 646 ProSiteProfiles Protein kinase domain profile. 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01879 646 Gene3D Transferase(Phosphotransferase) domain 1 402 618 - -
Accr9g01879 646 Pfam Protein kinase domain 326 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01879 646 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 636 IPR044652 GO:0004672
Accr9g01879 646 SMART serkin_6 325 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01879 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Accr9g01879 646 MobiDBLite consensus disorder prediction 614 639 - -
Accr9g01879 646 Gene3D Phosphorylase Kinase; domain 1 297 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01879 Accr-Chr9 40729419 40732661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01879 37 646 Receptor kinase-like Gene Family AT1G25390 41.613 3.81e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr9g01879 Pkinase 7.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01879 - - gmx:100791822 556.214