Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01870 ATGATTCGACTTTACATATCTCCCTTCCTCTTGTTCTCTGAACTGTTACTGCTATTTCTAGCTGGACTTGGAAAGGGAAACCTTGAAAAGTGTCCTCAATCATTTGACTGTGGAGAACTTGGGAAGATCCGCTTCCCTTTCACTAAAGCAGAAAGACAGGATTGTGGCTTAATGGTGATACATGGTTGTGATGATCCTCCATCTTCGAATAAAACGATTCAGCTAGAGCAAAATGGAAGGCCATTAGAGCTCACAAGCGTCATTCAGCAGAATAACTCTCTTTCTGTTATTGTTACTGATCTAGATCTTCGAAAGAGGTTGAAATCCAAAACTTGTCAAGTTTTCAACAAGAATATAACTCTTCCTCATGCTTCTCCTTTGGTTTCTTTTCATATCAAACATAACATAACCTTGGTCAGATGTGATCACAACCTCAAAATCAGCCCTCCTGCAAATGTTTATAACTATACCTGCCATAACTATAATATCTATCATTACCACTTGAACAAGCTTGCTCTACTTGATCATTATTACCAAAGATCTTTTTCAGGTTGTTCTGTTCTTCTGCTCCCAAGTAAACACCAGACTCACACCAAAGACCTTTTCTCATTCTTAAATGCTCAAATGGTTATTGAAGTACAACTATCTGATGCTTGTGTAAAGTGTTACAACAACATAGGTGGCCAATGTCGACTAGACAGCAATAGGAACTTCTATTGTGACAAAGAGAAAACTGGAAAAACCGTGCTCATTGCAACAACAGTAGCTTCTTCTATGGGTCTTGCTGTGTTATTATTGTTCCTGGCCTTTTGCTATAGAAGAAAGCTTCTTTCTCTTGCATCGTCAAGTCTCTCTTGGAGGAAAAAACTTCAAATTCATCAAATAACTGAAGCCTCTCTGAAGCAACATGGACCAATCTCTTCAAGACAGTACAGTTACTCTGAGATAAAGAAAATCACAAGCTGTTTCAAAATCAAATTAGGCAAAGGAGGGTATGGAACTGTATATAAAGGGAAGCTACTAGATAATACCAAGCGTCTTGTTGCAGTGAAAGTGCTAAGTCAACTAAAATGTACTGATGTGGAATTCATCAATGAAGTTGCAAGTATCAGCAGGACATCTCATGTTAATATTGTTGGCCTTCTAGGCTTTTGTTTCCAAGGTACCAAAAGAGCTCTAGTTTACGAGTTTATGCCTAATGGATCTCTCGAAAAATTCATATATGAACGCCAATTGGACTGTCAAACTCTGTTTAGTATTGCAGTTGGTGTTGCTAGAGGATTAGAGTACTTACACAGGGGCTGCAACAAAACCAAAATCCTGCACCTTGACATAAAACCTCATAACATCCTACTTGATAACGAGTTTTGCCCAAAAATTTCAGATTTTGGACTCGCTAAAGTGCTGCCAATAAAAGATCGGATTGTGTCCATTTTGGAAGCAAGGGGTACTGTAGGATACATTGCTCCTGAAGTGTTTTCAAGGAACTTTGGCGACGTGTCTCACAAATCAGATGTCTTCAGTTATGGAATGGTGGTTCTAGAAATGGTTGGAGGAAGAAGGAACATGAATGTTGGAATTGATCGTTCCAGTGAAACATATGTTCCGCAATGGATTTATAAGCGCTTAGAGCTGAATCAAGAACTAGAACTGGGCTGCATTAAGAATGATACTGATAAAGAAATGATAAGAAGAATGACAATCGTGAGCTTATGGTGCGTACAAACTGAACCTTCAGTGAGACCAGAAATGAGTAAAGTAGTGGAAATGTTGGAAGGAAGCTTGGAATCTTTGCAAGTACCTCCTAAGCCTTTTTTCTTCTCTTCTTCAACATCTCCTGTTCATTCCACATCTCAAACATGTGAGATTATGCAGTTGTAG 1881 0.3876 MIRLYISPFLLFSELLLLFLAGLGKGNLEKCPQSFDCGELGKIRFPFTKAERQDCGLMVIHGCDDPPSSNKTIQLEQNGRPLELTSVIQQNNSLSVIVTDLDLRKRLKSKTCQVFNKNITLPHASPLVSFHIKHNITLVRCDHNLKISPPANVYNYTCHNYNIYHYHLNKLALLDHYYQRSFSGCSVLLLPSKHQTHTKDLFSFLNAQMVIEVQLSDACVKCYNNIGGQCRLDSNRNFYCDKEKTGKTVLIATTVASSMGLAVLLLFLAFCYRRKLLSLASSSLSWRKKLQIHQITEASLKQHGPISSRQYSYSEIKKITSCFKIKLGKGGYGTVYKGKLLDNTKRLVAVKVLSQLKCTDVEFINEVASISRTSHVNIVGLLGFCFQGTKRALVYEFMPNGSLEKFIYERQLDCQTLFSIAVGVARGLEYLHRGCNKTKILHLDIKPHNILLDNEFCPKISDFGLAKVLPIKDRIVSILEARGTVGYIAPEVFSRNFGDVSHKSDVFSYGMVVLEMVGGRRNMNVGIDRSSETYVPQWIYKRLELNQELELGCIKNDTDKEMIRRMTIVSLWCVQTEPSVRPEMSKVVEMLEGSLESLQVPPKPFFFSSSTSPVHSTSQTCEIMQL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01870 626 FunFam PR5-like receptor kinase 398 603 - -
Accr9g01870 626 ProSiteProfiles Protein kinase domain profile. 321 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01870 626 SUPERFAMILY Protein kinase-like (PK-like) 303 592 IPR011009 -
Accr9g01870 626 Pfam Protein tyrosine and serine/threonine kinase 325 591 IPR001245 GO:0004672|GO:0006468
Accr9g01870 626 Gene3D Transferase(Phosphotransferase) domain 1 398 600 - -
Accr9g01870 626 SMART serkin_6 321 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01870 626 PANTHER RUST RESISTANCE KINASE LR10-RELATED 297 612 IPR045874 GO:0004672
Accr9g01870 626 ProSitePatterns Protein kinases ATP-binding region signature. 327 351 IPR017441 GO:0005524
Accr9g01870 626 Gene3D Phosphorylase Kinase; domain 1 280 397 - -
Accr9g01870 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01870 Accr-Chr9 40510247 40512885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01870 309 606 Receptor kinase-like Gene Family AT4G18250 57.143 9.01e-116 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr9g01870 PK_Tyr_Ser-Thr 5.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01870 - - pcin:129284583 649.818