Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01867 ATGGCGATGCCAAACGGAGCTATGGCGATAGTAAATGGCAATATGAACACAGTTGATTCCTCATCTTCACCTTCCAAGACTTGCTTAAAAAAATCGCCGATTCTGATATTCTCTTTCTTCCATAAAGCTATTCGCTCTGAGCTCGATAGCCTCCATCGAGCCGCATTGGATTTTGCCACTAACCAACAAGCTGCTGCCTCTGACATCAAACCCTTGTTCGACCGTTGTCACTTTCTTCATACTATCTATAAGCATCATTGCAATGCAGAGGATGAGGTCATATTTCCTGCATTAGATATACGTGTGAAGAATGTTGCGCGAACGTATTCCTTGGAGCATGAGGGAGAGGGTCTTCTTTTTGATCAATTGTTCAAGCTGCTAAATTGTAATTTGCTAGAGGAAGAGGGATACCGTAGGGAATTAGCTTCTTGTACTGGTGCCCTTCGAACATCAATTAGTCAGCATATGTTTAAGGAAGAGGAGCAGGTCTTCCCCTTGGTTATTGAGAACTTTTCATTTAAAGAGCAAGCATCACTGGTGTGGCAATTTCTTTGCAGCTTACCAGTTAAAATGATGGCAGAATTTCTTCCCTGGCTTGCTTTGTATGTATCATCCGATGAACATCAGGATATGCTTAAGTGCTTGTGCTCAATAATTCCTGAGGAGAAGCTTCTTCAACAGGTTGTTTTTGGATGGATGGAAGGGGTGAAGATTAAATGTAGAAGCTGCATAAATGATACCAAGGCTCATTGTGAGAATGTTGGGACACATGACCTAACCAATTGCTCTGAAAAGGTGTATTGTGCTTGTGAACTGGTCAAAACTGGAAAAAGGAAATGGATGGAGCCAAGCGTTGATCATACCAGTTCTTTTTCATCATGCCCTATAGATGAATTATTACTCTGGCATAAGGCCATAAAACAAGAGTGGATTGATTTAACTGAAGCTGTTAGGAAGATACAGCTTTCTGGAAAATTTTCTGATTTGTCTGCGTTTAATGGCAGATTGCAGTTTATTACTGAAGTCTGCAACTTTCATAGCATTGCTGAGGACAAAGTTATATTCCCTGCTATAGATGCAGATATTTCTTTTCTTGATGAGCATGCTGATGGCGAACTTCAGTTTGACAAGCTTAGATCCCTGATGGAAGGAATTCAGAATGCTGAAGTCAACTCATCATCTACTGAGGATTACATGAAGTTGAGGTCTCACACTGAACAAATAAAGAACACCATACTGATGCACTTTGACAATGAGGAAGCTCAGGTTCTACCACTTGCAAGAAAACATTTTAGCCCCCAAAGACAACGAGAACTACTTTATGAAAGTTTGTGCTTAATGCCTTTGAAATTGATTGAATCTGTAATACCATGGCTGGTCGGATTTCTAAGTGAAGAAGAAGCGAAGTTATTTCTGCTGAATATGTATATGGCAGCCCCGACAACAGATTATGCATTAATTACACTGTTTTCTGGTTGGGCATGCAAAAGAAAATCAAGGAACAATGATCCCTATTCAAGTAAAACAGGTTTGTGTTCTGCAAGGAAATTATCGGAGATAGAAAGCACTAGTCCATCATTCTGCATATGTGCACCTTCATTTAGTCGCAAGAAAAAATACTCATCCATACTACAAGATGGTGCACATGGAAGTAATGGACCAGTCAAATATGGAAAGCTACAACTGAGGGATGGGAATGATGTTTCTTCCGTCACTGGGACCGGAGAATCTTTTACCTTGCCTGATAATCAGACTTGCTGTGTCCCTGGATTAGGGGTGAACGCAAGTCATCTGGGAGCAAATTCATTAGTCCCTACAAAATCTCTGCGATCCTTATCTAATGGTTCTGCTCCGTCCTTTAACTCTAGTTTGTTTGTCTGGGAAACAGATGTAGTCTCTGCTGACAATGGGTTCAAAACACGACCTATTGATAACATATTTAAATTTCACAAAGCCATTTGTAAAGACTTGGAGTATATAGATGCTGAATCTGGAAAATTGTTTGATTGTGATGAAAATTTCCTGAGGAAGTTCACTGGTAGATTTCGCTTACTGTGGGGTTTGTACAGAGCTCATAGCAATGCAGAGGATGATGTAGTATTTCCAGCGTTAGAATCAAAAGAAACTCTTCACAATGTGAGCCACTCCTACACTTTGGACCACCAGCAGGAAGAGAAATTATTTGTAGATATTTCATCTGGACTCTCCGAGCTTACTCAATTACATGAATCCTTGAATAATAAGAATTCATCTGACGACTTTACCAGCTTCTACTCTGATTATTCCGGTTGTTCTGATACCATACAAAAGTACAATGAGCTAGTTACAAAGATCCAGGGCATGTGCAAATCTATCAGAGTAACACTAGATCAACATATCTTCCGTGAAGAACTTGAGTTATGGCCACTATTTGACGTTCATTTTTCTGTGGAAGAACAGGATAAAATTGTTGGTCGTATAATTGGTACTACTGGGGCAGAGGTTCTTCAATCAATGCTGCCATGGGTAACTTCTGCTCTCACACAAGAGGAGCAAAACAAAATGATGGACACATGGAAGCAGGCTACCAAAAACACCATGTTCAATGAGTGGCTTAATGAGTGGTGGGAAGGGCCCTCCTCAATTTCAAACACAACTACACCTAGTGACCATGTTTCACTAGATGCTGGTGCCTTTGGCAATTTGGATCATAGCTCTCAAGCTTTCAGGCCCGGCTGGAAAGATATATTCAGGATGAACCAGAATGAACTAGAATCAGAAATTAGAAAAGTTTCTCGAGATTCAACTCTTGATCCAAGAAGGAAATCCTATCTTATTCAAAATCTATTGACAAGTCGCTGGATAGCTTCTCAGCAGAAGTCATCCAAAGAAACAGATGAATTTGGAAATGGAGATGTACTTGAAAGATCGCCTTCGTTTCATGATCCAGAGAAAAAAATCTTTGGATGTGAGCATTACAGAAGAAATTGTAAACTTCTTGCTGCTTGCTGTGGAAAGCTATTCTCCTGCAGGTTTTGCCATGACAAAGTCAGTGACCATTCCATGGATAGGAAGGCTACAACTGACATGATGTGCATGCGCTGCCTGCAATTACAGCCAATCGGACCAGTTTGTGCAACACCTTCTTGTGGTGGTCTGTCAATGGCAAAGTACTACTGTAGTATTTGCAAGTTTTTTGATGATGAAAGGACAGTTTACCATTGCCCTTTCTGCAATATATGCCGTCTGGGGAAAGGACTTGGTGTTGATTCCTTCCATTGCATGCAGTGTAATTGTTGCTTGTCAATGCAATTAGTTGACCACCAGTGCCAGGAAAAAAGCTTAGAAACGAACTGCCCCATCTGCTGTGATTTTTTGTTCACATCTAGTGCATCTGTCAGAGCTCTTCCTTGTGGCCATTTCATGCATTCTACTTGCTTTCAGGCATATACTTGTAGTCACTACACCTGTCCGATTTGTCGCAAATCTTTGGGAGATATGGCGGTTTATTTTGGCATGCTTGATGCTCTATTGGCTTCTGAGGAACTCCCTGAAGATTATCAGAATCGCCGTCAGGATATACTATGTAATGATTGTGATAAGAAGGGGACTGCACCATTCCATTGGTTATACCATAAGTGTGGGTTATGCGGATCTTATAATACAAGAGTGATTTAA 3657 0.4069 MAMPNGAMAIVNGNMNTVDSSSSPSKTCLKKSPILIFSFFHKAIRSELDSLHRAALDFATNQQAAASDIKPLFDRCHFLHTIYKHHCNAEDEVIFPALDIRVKNVARTYSLEHEGEGLLFDQLFKLLNCNLLEEEGYRRELASCTGALRTSISQHMFKEEEQVFPLVIENFSFKEQASLVWQFLCSLPVKMMAEFLPWLALYVSSDEHQDMLKCLCSIIPEEKLLQQVVFGWMEGVKIKCRSCINDTKAHCENVGTHDLTNCSEKVYCACELVKTGKRKWMEPSVDHTSSFSSCPIDELLLWHKAIKQEWIDLTEAVRKIQLSGKFSDLSAFNGRLQFITEVCNFHSIAEDKVIFPAIDADISFLDEHADGELQFDKLRSLMEGIQNAEVNSSSTEDYMKLRSHTEQIKNTILMHFDNEEAQVLPLARKHFSPQRQRELLYESLCLMPLKLIESVIPWLVGFLSEEEAKLFLLNMYMAAPTTDYALITLFSGWACKRKSRNNDPYSSKTGLCSARKLSEIESTSPSFCICAPSFSRKKKYSSILQDGAHGSNGPVKYGKLQLRDGNDVSSVTGTGESFTLPDNQTCCVPGLGVNASHLGANSLVPTKSLRSLSNGSAPSFNSSLFVWETDVVSADNGFKTRPIDNIFKFHKAICKDLEYIDAESGKLFDCDENFLRKFTGRFRLLWGLYRAHSNAEDDVVFPALESKETLHNVSHSYTLDHQQEEKLFVDISSGLSELTQLHESLNNKNSSDDFTSFYSDYSGCSDTIQKYNELVTKIQGMCKSIRVTLDQHIFREELELWPLFDVHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKNTMFNEWLNEWWEGPSSISNTTTPSDHVSLDAGAFGNLDHSSQAFRPGWKDIFRMNQNELESEIRKVSRDSTLDPRRKSYLIQNLLTSRWIASQQKSSKETDEFGNGDVLERSPSFHDPEKKIFGCEHYRRNCKLLAACCGKLFSCRFCHDKVSDHSMDRKATTDMMCMRCLQLQPIGPVCATPSCGGLSMAKYYCSICKFFDDERTVYHCPFCNICRLGKGLGVDSFHCMQCNCCLSMQLVDHQCQEKSLETNCPICCDFLFTSSASVRALPCGHFMHSTCFQAYTCSHYTCPICRKSLGDMAVYFGMLDALLASEELPEDYQNRRQDILCNDCDKKGTAPFHWLYHKCGLCGSYNTRVI 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01867 1218 CDD Hr-like 36 165 - -
Accr9g01867 1218 ProSiteProfiles Zinc finger CHY-type profile. 976 1045 IPR008913 GO:0008270
Accr9g01867 1218 Pfam Ring finger domain 1111 1154 IPR001841 -
Accr9g01867 1218 SUPERFAMILY RING/U-box 1111 1158 - -
Accr9g01867 1218 Gene3D nmb1532 protein domain like 297 442 - -
Accr9g01867 1218 Gene3D nmb1532 protein domain like 32 185 - -
Accr9g01867 1218 SUPERFAMILY Zinc hairpin stack 1049 1104 IPR037275 -
Accr9g01867 1218 FunFam Zinc finger protein BRUTUS 637 867 - -
Accr9g01867 1218 SMART ring_2 1112 1153 IPR001841 -
Accr9g01867 1218 SUPERFAMILY CHY zinc finger-like 975 1039 IPR037274 GO:0008270
Accr9g01867 1218 Pfam Zinc-ribbon 1159 1216 IPR039512 -
Accr9g01867 1218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1105 1156 IPR013083 -
Accr9g01867 1218 Pfam CHY zinc finger 983 1058 IPR008913 GO:0008270
Accr9g01867 1218 FunFam Zinc finger protein-related isoform 1 1107 1156 - -
Accr9g01867 1218 Gene3D nmb1532 protein domain like 638 868 - -
Accr9g01867 1218 ProSiteProfiles Zinc finger RING-type profile. 1112 1154 IPR001841 -
Accr9g01867 1218 Gene3D - 1182 1218 - -
Accr9g01867 1218 CDD Hr-like 297 425 - -
Accr9g01867 1218 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 685 1218 - -
Accr9g01867 1218 CDD Hr-like 646 802 - -
Accr9g01867 1218 CDD RING-H2_Pirh2-like 1111 1154 - -
Accr9g01867 1218 ProSiteProfiles Zinc finger CTCHY-type profile. 1048 1111 IPR017921 -
Accr9g01867 1218 Pfam Hemerythrin HHE cation binding domain 642 803 IPR012312 -
Accr9g01867 1218 Pfam Hemerythrin HHE cation binding domain 41 167 IPR012312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01867 Accr-Chr9 40468264 40476209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01867 32 1218 C2H2 Transcription Factor Family AT3G18290 61.686 0.0 1476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01867 K16276 - gmx:100783072 1782.69