Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01842 ATGAGACCAGAAGAGAACCCGTTAGACCTCAACAATTTGCCTGATGACTACTCTCGGGATGGTAAACAAGTCCTTGAAGACGCTTTCTCTGGTTGCAGGAAAAAGAAAAGCGGCGGGAAGGAGGGAAAAGAAGATTGTGGTAAGATCTACGAGTGTAGGTTTTGTTCCCTCAAGTTCTGCAAATCTCAGGCTCTTGGAGGTCACATGAACCGTCACCGCCAAGAAAGGGAAACGGAAACCCTTAACCATGCTCGTCAGCTCGTCTTCCGTAACGATCATTCCATAGCCCCTCATCACTTAGGGTGTTGCCAACAACCAGTAGTGACAGGAGGGAGCTACACCAACGTAGGAGATCCAACGATGTCTCTGAGATTTCCCACATACTTGTCTCCTTCAACATCATCATCTTCTTCACACTATAATAACAACACCTCTCGTCACTACGACCCAGTGAGCCATTACTATGTGGGTCATGCTCTTCACAATAATCACACCTATGTGGGAAGCACTAGTAGTACCGGTGGCGGCGGCGAGTCTGGTTACACCTGCATTGGAGCACCGGTGGGGCATGGATTCGGTGGTGGTGGAGACGATGGGTCACTGCAGTACAATCATGGCTATAATCCTTCAGTGATCAATCGGTTTCAAGATGGATTCTGA 660 0.4848 MRPEENPLDLNNLPDDYSRDGKQVLEDAFSGCRKKKSGGKEGKEDCGKIYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFRNDHSIAPHHLGCCQQPVVTGGSYTNVGDPTMSLRFPTYLSPSTSSSSSHYNNNTSRHYDPVSHYYVGHALHNNHTYVGSTSSTGGGGESGYTCIGAPVGHGFGGGGDDGSLQYNHGYNPSVINRFQDGF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01842 219 PANTHER ZINC FINGER PROTEIN JAGGED 34 191 IPR045320 GO:0003700
Accr9g01842 219 MobiDBLite consensus disorder prediction 1 20 - -
Accr9g01842 219 FunFam Zinc finger protein STAMENLESS 1 26 99 - -
Accr9g01842 219 ProSiteProfiles Zinc finger C2H2 type domain profile. 50 77 IPR013087 -
Accr9g01842 219 SUPERFAMILY beta-beta-alpha zinc fingers 48 78 IPR036236 -
Accr9g01842 219 Gene3D Classic Zinc Finger 30 99 - -
Accr9g01842 219 ProSitePatterns Zinc finger C2H2 type domain signature. 52 72 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01842 Accr-Chr9 40068375 40069839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01842 4 191 C2H2 Transcription Factor Family AT1G13400 42.157 4.57e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01842 - - aprc:113871902 236.884