Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01833 ATGCCGGAGCCTCGAAATCAGCCGTCAAACCAGACTATGAACCTGAACAATTCCTGCAAAAGGATGAAGCAACAGAAGCAAAATCCTATTCCGACGAGAAAGCTTCGCATAATCTGTGACGACCCTTATGCCACAGATTCGTCTTCAAGCGAAGACGAAGGAGGAAACCAACGGTTCGACACTCGTCGGCCGAGGAAGATGAAGCGAATCGTTAGTGAAATCACTCTTCCTCTTGCTCCTGCCAGTTCTAAATCCACTGAAACTGAAAGCTCATTTCAGGAAAGCAACAACGGAGTCACCACCAAGTTTGCAGATGGTCAAACCCGGAACAAGAGGGTTTTGACCAAAACCCCATCATCAACAAAAAGCTCGTCTTCTTCCAGATTCAGAGGCGTCCGACAGAGAAAATGGGGCAAATGGGCTGCTGAAATTCGTGATCCCTTCAAAGGTGTTCGTATCTGGCTTGGTACTTACAATACTGCTCAAGAAGCTTCTCAAGCCTATGAATCAAAGAAGATGGAGTTCGAATCCATGGCTAAGGCTCAACTACGTGCTCAAGCTCAATCTGATAAGAGTCACATTGTTTCTTCTTCCTCTGCCCATCAAGTTGCTGCTTCTGCATCAGAAGATTCAGAGAGTGTCTTCTCCCACACCTCACCTTCCTCTGTGCTTGAACTCGATACCTCAACTTCCAAATCCACTGAAGATGCTGCTAACACCAGCAACAGCAGTTCAAGTAAAGAACATAACGAAGAACAAGGAGAGAATAAACAAGGAGAAGAACAAGCAGCGGAAGTTGTAGCTTCTGCTATAGCTATGGAAGCTGATAGTTACGAAAACGAATTTGCAGAACTGCAAATCCCAGATTTGAGCTTCCTGAACGAGCCACCATTAGTACAAGCACCGCAACTAACAATATCGTCATCTGAAACCGCAGCCGCATTAGCAGATCTTTCAGGATTTGGTCTGGACTGGGCTATGGTTGACGATTTTAGTAATGGTTTGGATGGTCCTCTTGATTTGGATGACATGCTGATTTCTGGGTTTGATGAGGATGACATGAATGCGAGTGAGCTGCCTGATTTTGATTTTGATCTGTTTACTGATGAGTTTGCTGGTTGGACTGAGGAGCCCCTAAAATTTATACCTTGCTTATAA 1158 0.4499 MPEPRNQPSNQTMNLNNSCKRMKQQKQNPIPTRKLRIICDDPYATDSSSSEDEGGNQRFDTRRPRKMKRIVSEITLPLAPASSKSTETESSFQESNNGVTTKFADGQTRNKRVLTKTPSSTKSSSSSRFRGVRQRKWGKWAAEIRDPFKGVRIWLGTYNTAQEASQAYESKKMEFESMAKAQLRAQAQSDKSHIVSSSSAHQVAASASEDSESVFSHTSPSSVLELDTSTSKSTEDAANTSNSSSSKEHNEEQGENKQGEEQAAEVVASAIAMEADSYENEFAELQIPDLSFLNEPPLVQAPQLTISSSETAAALADLSGFGLDWAMVDDFSNGLDGPLDLDDMLISGFDEDDMNASELPDFDFDLFTDEFAGWTEEPLKFIPCL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01833 385 MobiDBLite consensus disorder prediction 1 133 - -
Accr9g01833 385 SUPERFAMILY DNA-binding domain 127 175 IPR016177 GO:0003677
Accr9g01833 385 Gene3D AP2/ERF domain 127 183 IPR036955 GO:0003700|GO:0006355
Accr9g01833 385 PRINTS Ethylene responsive element binding protein signature 151 167 IPR001471 GO:0003700|GO:0006355
Accr9g01833 385 PRINTS Ethylene responsive element binding protein signature 129 140 IPR001471 GO:0003700|GO:0006355
Accr9g01833 385 PANTHER DNA-BINDING DOMAIN 90 257 IPR044808 GO:0003700|GO:0009873
Accr9g01833 385 Pfam AP2 domain 127 176 IPR001471 GO:0003700|GO:0006355
Accr9g01833 385 MobiDBLite consensus disorder prediction 78 131 - -
Accr9g01833 385 CDD AP2 128 168 IPR001471 GO:0003700|GO:0006355
Accr9g01833 385 ProSiteProfiles AP2/ERF domain profile. 128 186 IPR001471 GO:0003700|GO:0006355
Accr9g01833 385 SMART rav1_2 128 192 IPR001471 GO:0003700|GO:0006355
Accr9g01833 385 MobiDBLite consensus disorder prediction 1 31 - -
Accr9g01833 385 MobiDBLite consensus disorder prediction 184 264 - -
Accr9g01833 385 MobiDBLite consensus disorder prediction 184 247 - -
Accr9g01833 385 MobiDBLite consensus disorder prediction 53 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01833 Accr-Chr9 39793489 39794646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01833 17 364 AP2-EREBP Transcription Factor Family AT1G68550 34.091 1.93e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr9g01833 AP2 4.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01833 - - pcin:129321238 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01833 9 39793489 39794646 Accr9g01833 9 39793489 39794646 ECH