Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01822 ATGGAGAGATTTGCTTCTGCGAGGGCCACGACGTCGTGTGGGTATTTGAGTTGGCAGGAGGTGTTCGTCTCCGGCGGCGAAAGCAAGGGAAGGAACGAGGTGCGTTATTTTCTCAAAAGAAGCGATGGGAGCTCAGATCTGGCCGTGGTTGGGAGAGAAAAGAGCACGAGGCATATGTCTTATAGCTATTCTATTAGACATGAGGTCCTTGCCTTCGTTGGGTCGTCGACCCCGTCGGTATTGAAGCTCAAATCACGCCGAGATGTTATTGATTGGTTGAATTCCATTGTTTCAGATTCACAACGCGAGGGTGCGTCTATCAGGGCACAAAAAGGGGGCAGTGGAGACAACATGGTAGCCTCGAAGAAGGATAATCAATTGCGGAAGCTGGGCCATTGTATAAAAGAGTTCTCATGGTCAGGGTCTTCTTGGACGTGTAAGAAACGAAGAAAACACTATGAGTCATTTAGATGGAATGATTTAAAGATATCCGTTCATGATTTCGTATATGTTTTAGCAGAAGAAGATAAGCGTCTCGTTGCCTACCTGGAAGACATGTATGAAGACTCCAGAGGCAACAAGATGGTTATGGTACGCTGGTTTCACAAAATTGATGAGGTTGGTAATTTTTTGCCTCACAGTTTTAGTGACAGAGAGATTTTCTTTTCTCTTTGTCTTCAAGATCTGAGCATCGAGTGCATAGATGGATTGGCTACTGTACTCAGCCCCCAGCATTACAAAAAGTTTCAGAACGAAGCAAGGCATACTATGTTGGAACCATTTGTCTGCGACAATCAATTTGACAATGAAGATGTTAAGCACTTTGATATTACTCAAGTTAAAGGTTACTGGAGACAGGAAATCCTCAGATATATGTATACCCATTCTGACGCAAAATCTAATGGAAGTTCTCAGCAATCTGATGACAAACTGGAAGAAGAGGACATCCAGTTTACGTCCAGGATAAGATCCAAAAAGAGGCTGCGCCTGGCAAAAGTTGATGGTGAAGGTGCTGCTATTGAAACGGGAAGTTTGAATGATAGTGGAAATGAAGCTAAAAGAAAAAATGGAAACAGTTCCTTAAAACAAGTTGGCCCCACAGCCAGCAAAGACACAAAAGAAAACGCTTTAGAGTATTTAGCAATAGGTTGTCAGGTTGAGATCCTCTCTCAGGACAGTGGCATTAGAGGCTGCTGGTTTAGAGCTTCGGTCATAAAGAAGCACAAAAATAAAGTGAAGGTGCAGTATCAAGACCTTCAGGATGCAGTTGATGAATCGAGGAAGCTTGAGGAATGGGTTTCTGCTTCTAGAATTGCGGCACAGGACCACTTGGATATCCGACTGAATGGACGGTCTACCATACGCCCAGCCCCTCAGTCTAGTATGTATAAATTTCCTGGGGTGGTTGGTTCCATTGTGGATGTCTGGTGGCATGATGGTTGGTGGGAAGGCATCATTGTGCAGAAAGAGTCTGAAGCTAAGTATCATGTTTATTTCCCAGGGGAGAAGTCACTGTCAATATTTGGATCTGGTGACTTAAGACAAGCTCAAGAATGGACAGGGACTGGGTGGTTTAAAGTAAACGGAAGGCCTGACCTTGTTAGTTCTATATTATCCAGCTTAAAAACATCACAAGTTCCTGGCAAATCGGCTGCAGCTGCATCTGCTGGAGATGCCAGACATTCAAAACAAGGCGGGGATAATAATAATGCAAATCTTGTAAGTGATAGTAAATCAAGAAAGCCCGAGCCGGTTCCAGACCTTTCAAAGGATGATCTCCTGTCTCAGTTAAGATGGAAGTCATCCAGGAAGAGAGGCCGAAGCCACGGCAGAAAGTCCCTGGATTCCTCTGACCCCAATACTTCTGATAGTTATATGATCTCAGCATCTTTAAAAGTGGTTGATCATGACGACTACAAATACAGCAGGGGGGATCAAGCCATGTTCAACTCTTCAGTGGTGCCCTCTTTAACTACTAACTTGGTCATGTGTAGGTGA 1998 0.4419 MERFASARATTSCGYLSWQEVFVSGGESKGRNEVRYFLKRSDGSSDLAVVGREKSTRHMSYSYSIRHEVLAFVGSSTPSVLKLKSRRDVIDWLNSIVSDSQREGASIRAQKGGSGDNMVASKKDNQLRKLGHCIKEFSWSGSSWTCKKRRKHYESFRWNDLKISVHDFVYVLAEEDKRLVAYLEDMYEDSRGNKMVMVRWFHKIDEVGNFLPHSFSDREIFFSLCLQDLSIECIDGLATVLSPQHYKKFQNEARHTMLEPFVCDNQFDNEDVKHFDITQVKGYWRQEILRYMYTHSDAKSNGSSQQSDDKLEEEDIQFTSRIRSKKRLRLAKVDGEGAAIETGSLNDSGNEAKRKNGNSSLKQVGPTASKDTKENALEYLAIGCQVEILSQDSGIRGCWFRASVIKKHKNKVKVQYQDLQDAVDESRKLEEWVSASRIAAQDHLDIRLNGRSTIRPAPQSSMYKFPGVVGSIVDVWWHDGWWEGIIVQKESEAKYHVYFPGEKSLSIFGSGDLRQAQEWTGTGWFKVNGRPDLVSSILSSLKTSQVPGKSAAAASAGDARHSKQGGDNNNANLVSDSKSRKPEPVPDLSKDDLLSQLRWKSSRKRGRSHGRKSLDSSDPNTSDSYMISASLKVVDHDDYKYSRGDQAMFNSSVVPSLTTNLVMCR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01822 665 MobiDBLite consensus disorder prediction 580 599 - -
Accr9g01822 665 Pfam BAH domain 162 271 IPR001025 GO:0003682
Accr9g01822 665 Gene3D - 133 277 IPR043151 -
Accr9g01822 665 MobiDBLite consensus disorder prediction 340 369 - -
Accr9g01822 665 MobiDBLite consensus disorder prediction 562 577 - -
Accr9g01822 665 MobiDBLite consensus disorder prediction 343 369 - -
Accr9g01822 665 SMART BAH_4 161 278 IPR001025 GO:0003682
Accr9g01822 665 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 370 612 - -
Accr9g01822 665 SMART agenet_At_2 465 521 IPR014002 -
Accr9g01822 665 SMART agenet_At_2 378 444 IPR014002 -
Accr9g01822 665 Coils Coil 409 429 - -
Accr9g01822 665 Pfam Agenet domain 383 458 IPR008395 -
Accr9g01822 665 CDD Tudor_Agenet_AtDUF_rpt1_3 380 438 - -
Accr9g01822 665 MobiDBLite consensus disorder prediction 549 622 - -
Accr9g01822 665 ProSiteProfiles BAH domain profile. 161 278 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01822 Accr-Chr9 39604133 39607344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01822 390 500 PHD Transcription Factor Family AT5G58610 30.435 7.13e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01822 - - qsa:O6P43_032763 756.133