Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01818 ATGGCTTCCGATGCACATGGCTCCCGTCGCAAGCACCGGCGTTCGTCCTCTCCTGAAGAAGTCGAGCGATCCTCGAAGCGTCACAAGCACCGCCATGGTCACCGCCGTCATCGGCACCGCCACGGGAGCAGGAAACGCGAAGAAGAGCTTGAACTCGATACCGAAACTGTTGATAAGGTTCCTCCCCCAACTCCTGCTCCTAATTTTGATCCGAAGATCACCAGGCCTGACGATGATGTGGAGGAAGGGGAGATTCTTGAAGAAGAGGGTTCCGGTGGCCGAGATGGTGAGATTCGAAAAAAGCATACGGAGTCCGATGCCGAGTCTGGTGAAATTATGGCCACGGGAGGTCGAGGTATTCGATCTGACAATTCAAATCCGGTACATTTGACTGAAGATATTTTGCATCAGAAAGATGCCATTCCTTCTAAAGAGATAGTAGGGATCAATGGTAAAGGCTCAGAAACTAATAATGAGAATATCAGCAATCGTAGATTTATTAGTCCAGGGTCGGATGGAGAAGATGATACTTGCCATCAGAGGCACACTGGTTATAGGAGAAATGAAGTTGATGGTTCTTCTACTCATTCTAGTGCTGAGTCTCTAGATGGTAAGCGTGCTAGAGCAAGTTCAGATAGTTTGGGCAATGGGCATTTGGATCGTAAATTTTCCAAACAGGATAAATGGCAGCATGGGGAGCTTGGATGTTTTAAAGAAAATGAGAAGCTGAAAGGTGACTATGATAATGAAGTTAATGAAGGCAAAGTAAGGATTCATAGAAAGAACTCCTCCCCTGAAAGTGGAGGCGGCAAATATAGGACCAGGGATAACTCACCTAGTTACAGGTGTAGGAGTCGATCCAGATCTAGTGGTCATACTCATAATATAGTAGAAGAATATTCTCATCCCAGGAGAAGGAATGGTGAGGAAAGAATTGAGGAGTATGGCAGGGAACGTGGACATGTTAGTTCAGATTTGATGGCAGGTGACAGAAGGGAGCGTCGTGAGGCCCGGGATAGAGGCTGGAGCAAGGACAGGGATGGGGATAGGGACCTAAGAAGGGGAAAGGAACGAGAAAGGAGCTGGAATAGGGAGGATGACCGTGTGCATAGGAGGGAAAAAGAACGTGAAAGGAGTCATGAGAAGGATAGAAGGGATGTAGAGAAAGATAGGAGCAGGGGAAGAGAGGTGGACAGGGATAGAAGAAGAGAAAAGGAGAGAGATAGAGATAGGAGCTGGGAGACAGTGGTTGATCGGGGTAGAAGTGATAGGGGAAGAGAGAGGAGCAGGGACAGAGCAAGGGTTGGAGAGAGGGATAGAGTCTGGGGGAGTGAAAGGGATGAAAAGCATCGAGAAAGAGATAAGATTAGGGAGAGGGAGAGGCATAAGGATAGAAACACTCTTGATAGAGATAAGAATCTGGGTTATGAGCATGGTAATGATAGCCGGGACAGAGATATGCGCTCTAGTCATTCAAGGTTTGAAGAAGCAGAAAGCCATCGGGAGAGAAAAAGAAATTCTGAGTCTCTGAAAGTTGATAACCATATGGACAGAGGTGAGGTTGAACAGGATGATTTAGATGAGACAGCTACGTTGCAATTTGCTGAACAAGAAGAGGAAGACCTGAATAGAATTAAGGAGGAGAGTAGGAGGAGGAGGGAAGCAATTTTAGAGAAATATAAAAGGCTGCAGCCGCAGCAGCATCAACAAGCAGAACGAACATCTGAAAATGAAGAAAAAGATAAGGATCCTGTGAATATTCCGGCTGCTGTTTCTGAAGCTCCTGATGCTAAGAATGATGGTATTGATGTTTTTGAAGCGGAACCATCTTTCACTGTCGGTAAATCTCCTCGAGAAAATGGGAATGATGCATCTGAGAAGATCCCTGGTGTTGCTCGGCGCTTGGGAGAGGGAACTCCAAAGAGTGAAAGGTCTGATGACGAATTCTGTGATGACATATTTGGTGAGACACCGACAGGAGTTCACAGAATGGGTAAAGGGGATGGATTGCGTGTTGACAGGGGTGGATTGCATGACAATTGGGATGATGCGGAGGGGTATTACAGCTATCGTTTTGGTGAGATACTTGATAGTCGATATGAAGTTATAGCAGCTCATGGTAGAGGTGTCTTTTCAACAGTTGTTCGTGCGAAGAATCTCAAGGCTGGTAATGGTGAGCCAGAAGAAGTAGCTATTAAAATTATTCGTAATAATGACACTATGTACAAGGCTGGTATGGACGAGTTGGTTATACTAAAGAAATTAGTAGGTGCAGATCCAGATAATAAGCGTCATTGTGTTCGTTTCCTTTCGAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTATATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAATCTAAAAGGTGTGCAATCGTATGCAAAACAACTTTTTATTGCACTGAAGCATCTTCGGAACTGTGGTGTTCTTCACTGTGATATAAAGCCAGACAATATGTTGGTGAATGAGGCTAAAAATGTGTTGAAGCTTTGTGACTTTGGTAATGCTATGTTTGCTGGAAAGAATGAAGTTACACCATATCTTGTGAGTCGGTTTTATCGTGCCCCTGAAATAATACTTGGCTTGCCATACGATCATCCGTTGGATATATGGTCTGTAGGGTGTTGTTTGTATGAACTCTACACTGGAAAAGTTCTTTTCCCAGGTCATACTAATAATGACATGTTAAGGCTTCACATGGAATTGAAGGGTCCTTTTCCAAAGAAGATGCTTCGTAAGGGAGCTTTTGTTGATCAACATTTTGACCAAGATTTGAATTTTCTTGCTACAGAAGAGGATCCGGTGACAAAAAAGGCTATAAAGCGGTTGATTCTCAACATAAAGCCCAAAGATATTGGAACTATCGTTGCTGGCTCTCCTGGAGAGGAGGCGGATCGAAAGAAGCTAGCCAATTTCAAAGATCTTCTGGACAAGATTTTTGTCTTGGATCCAGAGAAGAGATTGACAGTCTCACAAGCATTAGGCCACCCATTCATCACTGGCAAGTGA 3063 0.4424 MASDAHGSRRKHRRSSSPEEVERSSKRHKHRHGHRRHRHRHGSRKREEELELDTETVDKVPPPTPAPNFDPKITRPDDDVEEGEILEEEGSGGRDGEIRKKHTESDAESGEIMATGGRGIRSDNSNPVHLTEDILHQKDAIPSKEIVGINGKGSETNNENISNRRFISPGSDGEDDTCHQRHTGYRRNEVDGSSTHSSAESLDGKRARASSDSLGNGHLDRKFSKQDKWQHGELGCFKENEKLKGDYDNEVNEGKVRIHRKNSSPESGGGKYRTRDNSPSYRCRSRSRSSGHTHNIVEEYSHPRRRNGEERIEEYGRERGHVSSDLMAGDRRERREARDRGWSKDRDGDRDLRRGKERERSWNREDDRVHRREKERERSHEKDRRDVEKDRSRGREVDRDRRREKERDRDRSWETVVDRGRSDRGRERSRDRARVGERDRVWGSERDEKHRERDKIRERERHKDRNTLDRDKNLGYEHGNDSRDRDMRSSHSRFEEAESHRERKRNSESLKVDNHMDRGEVEQDDLDETATLQFAEQEEEDLNRIKEESRRRREAILEKYKRLQPQQHQQAERTSENEEKDKDPVNIPAAVSEAPDAKNDGIDVFEAEPSFTVGKSPRENGNDASEKIPGVARRLGEGTPKSERSDDEFCDDIFGETPTGVHRMGKGDGLRVDRGGLHDNWDDAEGYYSYRFGEILDSRYEVIAAHGRGVFSTVVRAKNLKAGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDNKRHCVRFLSSFKYRNHLCLVFESLYMNLREVLKKFGRNIGLNLKGVQSYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGHTNNDMLRLHMELKGPFPKKMLRKGAFVDQHFDQDLNFLATEEDPVTKKAIKRLILNIKPKDIGTIVAGSPGEEADRKKLANFKDLLDKIFVLDPEKRLTVSQALGHPFITGK 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01818 1020 Pfam Protein kinase domain 701 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01818 1020 MobiDBLite consensus disorder prediction 291 522 - -
Accr9g01818 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Accr9g01818 1020 SMART serkin_6 700 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01818 1020 Coils Coil 532 555 - -
Accr9g01818 1020 FunFam Serine/threonine-protein kinase PRP4 homolog 760 1018 - -
Accr9g01818 1020 Gene3D Transferase(Phosphotransferase) domain 1 760 1018 - -
Accr9g01818 1020 CDD STKc_PRP4 699 1017 IPR044092 GO:0004674|GO:0006468|GO:0045292
Accr9g01818 1020 MobiDBLite consensus disorder prediction 218 266 - -
Accr9g01818 1020 MobiDBLite consensus disorder prediction 572 586 - -
Accr9g01818 1020 MobiDBLite consensus disorder prediction 537 561 - -
Accr9g01818 1020 FunFam serine/threonine-protein kinase PRP4 homolog 671 759 - -
Accr9g01818 1020 Gene3D Phosphorylase Kinase; domain 1 671 759 - -
Accr9g01818 1020 ProSiteProfiles Protein kinase domain profile. 700 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01818 1020 MobiDBLite consensus disorder prediction 87 108 - -
Accr9g01818 1020 SUPERFAMILY Protein kinase-like (PK-like) 687 1019 IPR011009 -
Accr9g01818 1020 MobiDBLite consensus disorder prediction 150 167 - -
Accr9g01818 1020 MobiDBLite consensus disorder prediction 27 43 - -
Accr9g01818 1020 MobiDBLite consensus disorder prediction 1 587 - -
Accr9g01818 1020 MobiDBLite consensus disorder prediction 169 189 - -
Accr9g01818 1020 PANTHER DUAL SPECIFICITY PROTEIN KINASE 415 1018 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01818 Accr-Chr9 39559334 39566311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01818 696 1018 MAP Kinase Gene Family AT1G59580 31.268 1.59e-26 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Accr9g01818 Pkinase 6.5e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01818 9 39559334 39566311 Accr9g01818 9 39559334 39566311 ECH