Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01801 ATGAACTTCCAATCCCCACCTTCTCCGCCGCGGAAGGCGTACACCACGTCGCCGGTGATCGTAGCTTTCTCGCTCGGCGTCCTTATATGTCTCGTCGTAGGTGTCTTCTTAATCTACTTTTGTCGATGTTTCGTCATTAACTTCATCGACACCCGGGCCTTCCGTCGTCCCACCGTCAACAACCTCCTCCGCCAGATCTATTCCCCTAACCACACCGCCAACGCCGCTGCCGCGTCTCCGATCCCTGGCATCAACCCAGCGCTGCTCCAGATCTTTCCCACCTTCCCCTACTCATCCGTGAAGGAGTTCCAAAAAAATAACAACAACAACAAAAGCTACAGCCTAGAATGTGCCATTTGCTTGTTTGAATTCGAGGAAGATAGCTTCCTTCGCCTATTAACCTTTTGCTGCCATGTTTTTCACCAAGAATGTATCGATCTCTGGCTTGAATCTCACAAGACATGCCCTGTTTGTCGCTCAGATCTTGATTCCTTGTCAAAGGAAAAACATCAAGATCAAAATCAGACAATAATAACAGAGAATAATCCCGACGACGATCACCACAACGACAACGAGGCACGTATCAATGTAAGAGAAGAAGAAGAAGGTGTTTCAGGGGAAGGAGATCAAGAGAAGAGATTTTCAAAGTCACATTCAACGGGTCATTCTATAGTGGTGATAAAAGATGACGACGACGCTGATAAGAAGAAGTATAGTAAAGAAGATAGGTATACGTTGAGATTACCAGAACATGTTAGGATGAAATTGATGAGGGGACAGAATAATCACACATCAAAGAGTTGTGAATCTTACATGGAGATGACCAAGAATTTGTAG 837 0.454 MNFQSPPSPPRKAYTTSPVIVAFSLGVLICLVVGVFLIYFCRCFVINFIDTRAFRRPTVNNLLRQIYSPNHTANAAAASPIPGINPALLQIFPTFPYSSVKEFQKNNNNNKSYSLECAICLFEFEEDSFLRLLTFCCHVFHQECIDLWLESHKTCPVCRSDLDSLSKEKHQDQNQTIITENNPDDDHHNDNEARINVREEEEGVSGEGDQEKRFSKSHSTGHSIVVIKDDDDADKKKYSKEDRYTLRLPEHVRMKLMRGQNNHTSKSCESYMEMTKNL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01801 278 MobiDBLite consensus disorder prediction 169 228 - -
Accr9g01801 278 SMART ring_2 117 158 IPR001841 -
Accr9g01801 278 Pfam Ring finger domain 116 159 IPR001841 -
Accr9g01801 278 SUPERFAMILY RING/U-box 116 164 - -
Accr9g01801 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 166 IPR013083 -
Accr9g01801 278 PANTHER RING FINGER DOMAIN-CONTAINING 9 169 - -
Accr9g01801 278 FunFam E3 ubiquitin-protein ligase ATL6 72 165 - -
Accr9g01801 278 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Accr9g01801 278 MobiDBLite consensus disorder prediction 181 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01801 Accr-Chr9 39355008 39355844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01801 18 258 Rapid Response to Elicitors AT2G35000 32.567 6.25e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01801 - - pcin:129322653 336.265