Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01798 ATGCAGCGGCAGAAAATGGGGTTTCGAGAATACGTTGAAGCATTAGAAGAAGAACGCCAGAAAATTCAGGTGTTCTCTAGAGAACTTCCGCTTGCACTTGAGCTTGTCTCGCAAGCCATTGATGCTTATAGGCAACAACTTTCTGGAACGACGGAGTACAATGTTCATGGACAATCGGATTGTTCAGAGCAGACGTCAATGGAAGAAGGACCTGTTCTTGAAGAGTTTATTCCGATCAAGAAAAGAGATTCCCCTGATTGTGACAACGAAGAAGACGAAGATGAACAACATTCGCATAAGCATAAGATTCTCAAGGAAAACGATAATAAGAACTCCGATAAGAGAAAATCCGACTGGCTCAGATCCGTCCAGCTCTGGAATCCAGATCCCCCAACTAAAGAGGATTTGCCGAGAAAAGCGATGGTAGTGGAAGTGAAGAGAAATGGTGGTGCGTTCCAGCCATTTCACAGAGAAGACGATAATAATGTTGGAAAGACGAACAACAACAACAACAACATCACATCGGCCGCTAAATCTGCATCTCCGGCTGCTGTGCCTGCAATGAGCTCCACTGCCGGCGGCGGAGGCGGAAGCGTAAGCAAGGGATCGGAGGAGAAAGAAGGGCAGGGTCAGAGGAAGCAACGGCGGTGCTGGTCACCTGAATTACACAAACGCTTCTTACAAGCCCTTCAACAACTAGGCGGTCCAGATTCTGCAACTCCAAAGCAGATCAGAGAGCTCATGAGGGTGGATGGCCTCACAAACGATGAAGTCAAAAGTCACTTGCAGAAATTTCGTTTGCACACAAGAAGACCTAGTCCTATGATTCACAACAATGCTACATCACAAACAGCTCCGTTTGTCCTTGTTGGGAACATATTTGTGCAGCCACCAGAATATGCAGCGGCAGTGGCAACTTCAACAGCATCAGGCGAGGTGACCACAGTGACTACGCCGCCTGGGATTTATGCGCCGGTGGCGGCACATCTTCCGATGCCTGTGGTGGTGCCGCCTGTTGATAAGAAGGCTCAGGTGAAGCAATTGGAGCAGTCACATTCAGATGAAGAAAGGGTGAATCATGGTAGTGAAGGAGCTGTTCATTCAAATTCTTCTCCTGATTCATCATCTTCCACGCACACTACTTCTCATTCTCATGGATATTGA 1164 0.4759 MQRQKMGFREYVEALEEERQKIQVFSRELPLALELVSQAIDAYRQQLSGTTEYNVHGQSDCSEQTSMEEGPVLEEFIPIKKRDSPDCDNEEDEDEQHSHKHKILKENDNKNSDKRKSDWLRSVQLWNPDPPTKEDLPRKAMVVEVKRNGGAFQPFHREDDNNVGKTNNNNNNITSAAKSASPAAVPAMSSTAGGGGGSVSKGSEEKEGQGQRKQRRCWSPELHKRFLQALQQLGGPDSATPKQIRELMRVDGLTNDEVKSHLQKFRLHTRRPSPMIHNNATSQTAPFVLVGNIFVQPPEYAAAVATSTASGEVTTVTTPPGIYAPVAAHLPMPVVVPPVDKKAQVKQLEQSHSDEERVNHGSEGAVHSNSSPDSSSSTHTTSHSHGY 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01798 387 MobiDBLite consensus disorder prediction 79 116 - -
Accr9g01798 387 SUPERFAMILY Homeodomain-like 211 271 IPR009057 -
Accr9g01798 387 MobiDBLite consensus disorder prediction 150 218 - -
Accr9g01798 387 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 362 IPR044787 GO:0003700|GO:0006355
Accr9g01798 387 MobiDBLite consensus disorder prediction 342 387 - -
Accr9g01798 387 MobiDBLite consensus disorder prediction 164 179 - -
Accr9g01798 387 Gene3D - 212 270 - -
Accr9g01798 387 MobiDBLite consensus disorder prediction 345 362 - -
Accr9g01798 387 Coils Coil 8 28 - -
Accr9g01798 387 MobiDBLite consensus disorder prediction 54 73 - -
Accr9g01798 387 Pfam Myb-like DNA-binding domain 215 264 IPR001005 -
Accr9g01798 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 210 270 IPR017930 -
Accr9g01798 387 FunFam Myb family transcription factor 212 270 - -
Accr9g01798 387 MobiDBLite consensus disorder prediction 363 387 - -
Accr9g01798 387 NCBIfam myb-like DNA-binding domain, SHAQKYF class 213 268 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01798 Accr-Chr9 39293957 39295614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01798 10 328 G2-like Transcription Factor Family AT1G68670 49.702 6.01e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr9g01798 Myb_DNA-binding 3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01798 - - adu:107491291 418.313