Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01763 ATGCCCTTCAACTTCCTCAAACTAGCATTGTCCCATTTCAAATGGGTTTTAGAGTTCCTTGTTTATCACCCATTTTACACCCTTCATCATCATCAACCTCTTCAAGAGTTTCAGATACTTACAGAAGAAGAAGAACTAGTAGAGATATGGCATCCTCGTGAAGGAGAAGAAGAAGTGGATTGTGCAGTGTGTCTGAACAAGATTGGTGAAGGAGATGAAGTTAGAGTTCTTAGGTGTGAACATGTATTTCATAGAGAATGTTTGAATCAATGGGTTGGTCTCAGGAACTTTACTTGTCCTCTTTGTAGGGACTTTCTGGGTTCTAGCAATAGGGTTGTTAATGGAAGTCAAGTACACGTGCTTTTCTTGAAGTTTTCTTCATTCTCTGATAATTCTGATGAGCGTGATAACTGGTGGCTACGGTAA 426 0.3967 MPFNFLKLALSHFKWVLEFLVYHPFYTLHHHQPLQEFQILTEEEELVEIWHPREGEEEVDCAVCLNKIGEGDEVRVLRCEHVFHRECLNQWVGLRNFTCPLCRDFLGSSNRVVNGSQVHVLFLKFSSFSDNSDERDNWWLR 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01763 141 Pfam Ring finger domain 60 103 IPR001841 -
Accr9g01763 141 CDD RING-H2 61 103 - -
Accr9g01763 141 ProSiteProfiles Zinc finger RING-type profile. 61 103 IPR001841 -
Accr9g01763 141 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 108 IPR013083 -
Accr9g01763 141 PANTHER RING ZINC FINGER PROTEIN-RELATED 30 106 - -
Accr9g01763 141 SUPERFAMILY RING/U-box 47 108 - -
Accr9g01763 141 SMART ring_2 61 102 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01763 Accr-Chr9 38322605 38323030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01763 60 112 C3H Transcription Factor Family AT1G15100 58.491 1.09e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01763 K16282 - pcin:129296604 186.037