Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01762 ATGCCCTTCAAATTCCTCAAGCTAGCTTTGTCCCATTTCAAATGGGTTTTAGAGTTCCTTGTTTGTCACCCATTTTACAGCCTTCGTCTTCATCATCATCATCAACCTCTTCAAGACCAGTTTCAGATATTTACAGATGAAGAACCAGTAGAGATGTGGCATGCTCGTGAAGGAGAAGAAGAAGTGGATTGTGCAGTGTGTCTAAACAAGATTGGTGAAGGAAATGAAGTTAGAGTTCTTAGGTGTGAACATGTCTTTCATAGAGAATGTTTGGATCAATGGGTTGGTCTCCGGAACTTTACTTGTCCTCTTTGTAGGGACTTTCAGGGTTCTAGCAATAGGGTTGTTAATGGAAGACAAGTATCTGTGCTTTTCTTCAAGTTTTGTTCATTCTCTGATAATTCCGAGCGTGATAACTGGTGGCTACGTTGA 432 0.4074 MPFKFLKLALSHFKWVLEFLVCHPFYSLRLHHHHQPLQDQFQIFTDEEPVEMWHAREGEEEVDCAVCLNKIGEGNEVRVLRCEHVFHRECLDQWVGLRNFTCPLCRDFQGSSNRVVNGRQVSVLFFKFCSFSDNSERDNWWLR 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01762 143 ProSiteProfiles Zinc finger RING-type profile. 64 106 IPR001841 -
Accr9g01762 143 SUPERFAMILY RING/U-box 48 109 - -
Accr9g01762 143 Pfam Ring finger domain 63 106 IPR001841 -
Accr9g01762 143 PANTHER RING ZINC FINGER PROTEIN-RELATED 46 107 - -
Accr9g01762 143 SMART ring_2 64 105 IPR001841 -
Accr9g01762 143 CDD RING-H2 64 106 - -
Accr9g01762 143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 112 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01762 Accr-Chr9 38308862 38309293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01762 63 106 C3H Transcription Factor Family AT1G15100 63.636 1.10e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01762 K16282 - pcin:129296604 181.8