Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01761 ATGACCACTATTGGTGAAATAATCGCCAGATTTTTCATCCTGCTATTCACCATGCCCTTCAAATTCCTCAAGCTAGCTTTGTCCCATTTCAAATGGGTTTTAGAGTTCCTTGTTTGTCACCCATTTTACAGCCTTCGTCTTCATCATCATCATCAACCTCTTCAAGACCAGTTTCAGATATTTACAGATGAAGAACCAGTAGAGATGTGGCATGCTCGTGAAGGAGAAGAAGAAGTGGATTGTGCAGTGTGTCTAAACAAGATTGGTGAAGGAAATGAAGTTAGAGTTCTTAGGTGTGAACATGTCTTTCATAGAGAATGTTTGGATCAATGGGTTGGTCTCCGGAACTTTACTTGTCCTCTTTGTAGGGACTTTCAGGGTTCTAGCAATAGGGTTGTTAATGGAAGACAAGTATCTGTGCTTTTCTTCAAGTTTTGTTCATTCTCTGATAATTCCGAGCGTGATAACTGGTGGCTACGTTGA 483 0.4058 MTTIGEIIARFFILLFTMPFKFLKLALSHFKWVLEFLVCHPFYSLRLHHHHQPLQDQFQIFTDEEPVEMWHAREGEEEVDCAVCLNKIGEGNEVRVLRCEHVFHRECLDQWVGLRNFTCPLCRDFQGSSNRVVNGRQVSVLFFKFCSFSDNSERDNWWLR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01761 160 SMART ring_2 81 122 IPR001841 -
Accr9g01761 160 PANTHER - 8 127 - -
Accr9g01761 160 CDD RING-H2 81 123 - -
Accr9g01761 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 129 IPR013083 -
Accr9g01761 160 ProSiteProfiles Zinc finger RING-type profile. 81 123 IPR001841 -
Accr9g01761 160 SUPERFAMILY RING/U-box 65 126 - -
Accr9g01761 160 Pfam Ring finger domain 80 123 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01761 Accr-Chr9 38308862 38309344 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01761 80 123 C3H Transcription Factor Family AT1G15100 63.636 9.57e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01761 K16282 - pcin:129296604 181.8