Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01760 ATGCTCTTCAACTTCGTCAAGCTAGCTTCTCAAAATCTCAAATGGTTCATAGAATTCATCACCTACCACCCATTTCACAGCATGCGGGTTCATCATCAACTTTTTCTTCAAGATTTTGAGATGGTCACAGAAGAAGAAGAACGAGTCGAAATATGGCGTCCTCGCGAAGGAGGAGAAGAAGAAGTGGATTGTGCTGTGTGTCTGAGCAAGATCGGAGAAGGAGATGAAGTTAGAGTGCTGAGATGTGAACATGTTTTTCATAGAGGTTGTTTGAATCAATTGATTGGTCTCAGGAACTATACTTGTCCTCTTTGCAGGTACTTTCTAGGAGGAACAAGACATGTGATTTTCTATGGGTTTTCTGAGACTCATCAAGATCGTGAGAATTGGTGGCTTCGCTAA 402 0.4179 MLFNFVKLASQNLKWFIEFITYHPFHSMRVHHQLFLQDFEMVTEEEERVEIWRPREGGEEEVDCAVCLSKIGEGDEVRVLRCEHVFHRGCLNQLIGLRNYTCPLCRYFLGGTRHVIFYGFSETHQDRENWWLR 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01760 133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 109 IPR013083 -
Accr9g01760 133 Pfam Ring finger domain 63 106 IPR001841 -
Accr9g01760 133 ProSiteProfiles Zinc finger RING-type profile. 64 106 IPR001841 -
Accr9g01760 133 SMART ring_2 64 105 IPR001841 -
Accr9g01760 133 SUPERFAMILY RING/U-box 47 110 - -
Accr9g01760 133 PANTHER RING ZINC FINGER PROTEIN-RELATED 50 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01760 Accr-Chr9 38281784 38282185 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01760 63 109 C3H Transcription Factor Family AT1G15100 59.574 6.81e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01760 K16282 - pcin:129296604 154.451