Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01759 ATGCTGTTCAACTACCTCAAACTAGCTTTGTCCCATTTCAAATGGGGTTTAGAGTTTCTTCTTTACCACCCATTTCACAGCCTTCGTCTTCATCATCATCAGCCTCTTCAAGAGATTCATCAGATCTTTACAGAAGAAGAACAAGTGCAGATATGGCATCCACGTGAAGGAGGAGGAGAAGAAGTGGATTGTGCAGTGTGTTTGAACAAGATTGGTGAAGGAGACGAAGTTAGAATGTTGAGATGCGAACATGTTTTTCATAGAGAATGTTTGAATCAATGGGTTGGTCTCAGGAACTTTACTTGTCCTCTTTGTAGGCATTTTTTGGGTCCTGGGTTTAGGCCTCTTGTTAGTGGTGATGGAGGAGAAGCACTTCATGTGCTTTTCTTTAAGTTTTCTTCATTCTCTGATAATTCTGATGAGCGTGATTACTGGTGGCTACGGTGA 447 0.4161 MLFNYLKLALSHFKWGLEFLLYHPFHSLRLHHHQPLQEIHQIFTEEEQVQIWHPREGGGEEVDCAVCLNKIGEGDEVRMLRCEHVFHRECLNQWVGLRNFTCPLCRHFLGPGFRPLVSGDGGEALHVLFFKFSSFSDNSDERDYWWLR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01759 148 ProSiteProfiles Zinc finger RING-type profile. 64 106 IPR001841 -
Accr9g01759 148 SMART ring_2 64 105 IPR001841 -
Accr9g01759 148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 110 IPR013083 -
Accr9g01759 148 Pfam Ring finger domain 63 106 IPR001841 -
Accr9g01759 148 SUPERFAMILY RING/U-box 46 111 - -
Accr9g01759 148 PANTHER RING ZINC FINGER PROTEIN-RELATED 40 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01759 Accr-Chr9 38254741 38255187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01759 1 109 C3H Transcription Factor Family AT1G15100 35.965 2.91e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01759 K16282 - pcin:129296604 194.512