Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01758 ATGGCAACCACCACTCTTGCAATAATCTCCAGATTTTCTTCTCTTCTGTTCACCATGCTGTTCAACTACCTCAAACTAGCTTTGTCCCATTTCAAATGGGGTTTAGAGTTTCTTCTTTACCACCCATTTCACAGCCTTCGTCTTCATCATCATCAGCCTCTTCAAGAGATTCATCAGATCTTTACAGAAGAAGAACAAGTGCAGATATGGCATCCACGTGAAGGAGGAGGAGAAGAAGTGGATTGTGCAGTGTGTTTGAACAAGATTGGTGAAGGAGACGAAGTTAGAATGTTGAGATGCGAACATGTTTTTCATAGAGAATGTTTGAATCAATGGGTTGGTCTCAGGAACTTTACTTGTCCTCTTTGTAGGCATTTTTTGGGTCCTGGGTTTAGGCCTCTTGTTAGTGGTGATGGAGGAGAAGCACTTCATGTGCTTTTCTTTAAGTTTTCTTCATTCTCTGATAATTCTGATGAGCGTGATTACTGGTGGCTACGGTGA 501 0.4172 MATTTLAIISRFSSLLFTMLFNYLKLALSHFKWGLEFLLYHPFHSLRLHHHQPLQEIHQIFTEEEQVQIWHPREGGGEEVDCAVCLNKIGEGDEVRMLRCEHVFHRECLNQWVGLRNFTCPLCRHFLGPGFRPLVSGDGGEALHVLFFKFSSFSDNSDERDYWWLR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01758 166 Pfam Ring finger domain 81 124 IPR001841 -
Accr9g01758 166 SMART ring_2 82 123 IPR001841 -
Accr9g01758 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 128 IPR013083 -
Accr9g01758 166 ProSiteProfiles Zinc finger RING-type profile. 82 124 IPR001841 -
Accr9g01758 166 PANTHER RING ZINC FINGER PROTEIN-RELATED 57 127 - -
Accr9g01758 166 SUPERFAMILY RING/U-box 64 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01758 Accr-Chr9 38254741 38255241 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01758 81 127 C3H Transcription Factor Family AT1G15100 61.702 2.58e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01758 K16282 - pcin:129296604 194.512