Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr9g01758 | ATGGCAACCACCACTCTTGCAATAATCTCCAGATTTTCTTCTCTTCTGTTCACCATGCTGTTCAACTACCTCAAACTAGCTTTGTCCCATTTCAAATGGGGTTTAGAGTTTCTTCTTTACCACCCATTTCACAGCCTTCGTCTTCATCATCATCAGCCTCTTCAAGAGATTCATCAGATCTTTACAGAAGAAGAACAAGTGCAGATATGGCATCCACGTGAAGGAGGAGGAGAAGAAGTGGATTGTGCAGTGTGTTTGAACAAGATTGGTGAAGGAGACGAAGTTAGAATGTTGAGATGCGAACATGTTTTTCATAGAGAATGTTTGAATCAATGGGTTGGTCTCAGGAACTTTACTTGTCCTCTTTGTAGGCATTTTTTGGGTCCTGGGTTTAGGCCTCTTGTTAGTGGTGATGGAGGAGAAGCACTTCATGTGCTTTTCTTTAAGTTTTCTTCATTCTCTGATAATTCTGATGAGCGTGATTACTGGTGGCTACGGTGA | 501 | 0.4172 | MATTTLAIISRFSSLLFTMLFNYLKLALSHFKWGLEFLLYHPFHSLRLHHHQPLQEIHQIFTEEEQVQIWHPREGGGEEVDCAVCLNKIGEGDEVRMLRCEHVFHRECLNQWVGLRNFTCPLCRHFLGPGFRPLVSGDGGEALHVLFFKFSSFSDNSDERDYWWLR | 166 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr9g01758 | 166 | Pfam | Ring finger domain | 81 | 124 | IPR001841 | - | |
Accr9g01758 | 166 | SMART | ring_2 | 82 | 123 | IPR001841 | - | |
Accr9g01758 | 166 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 60 | 128 | IPR013083 | - | |
Accr9g01758 | 166 | ProSiteProfiles | Zinc finger RING-type profile. | 82 | 124 | IPR001841 | - | |
Accr9g01758 | 166 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 57 | 127 | - | - | |
Accr9g01758 | 166 | SUPERFAMILY | RING/U-box | 64 | 129 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr9g01758 | Accr-Chr9 | 38254741 | 38255241 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr9g01758 | 81 | 127 | C3H Transcription Factor Family | AT1G15100 | 61.702 | 2.58e-15 | 67.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr9g01758 | K16282 | - | pcin:129296604 | 194.512 |