Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01757 ATGGCAACCACCACTCTTGCAATAATCTCCAGATTTTCTTCTCTATTGCTCACCATTCTCTTCAACTACCTCAAACTAGCTTTGTCCCATTTCAAATGGGGTTTAGAGTATCTTCTTTATCACCCATTTCACAGCCTTCGTCTCCATCATCATCATCCTCTTCGAGAAATTCATCATATCTTTACAGAAGAAGAACAAGTGGAGATATGGCATCCACGTGAAGGAGGAGAAGAAGTTGATTGTGCAGTGTGTTTGAACAAGATTGGTGAAGGAGATGAAGTTAGAGAGTTGAGATGTGAACATGTTTTTCATAGAGAATGTTTGAATCAATGGGTTGGTCTCAGGAACTTTACTTGTCCTCTTTGTAGGCACTTTTTGGGTTCTGGGTTTAGCATGTCTGTCGTAAATGGTGATGGAGGAGAAGCACTTCATGTGCTTTTCTTTAAGTTTTCTTCATTCTCTAATAATTCTGATGAGCGTGATAACTGGTGGCTACGGTGA 501 0.4012 MATTTLAIISRFSSLLLTILFNYLKLALSHFKWGLEYLLYHPFHSLRLHHHHPLREIHHIFTEEEQVEIWHPREGGEEVDCAVCLNKIGEGDEVRELRCEHVFHRECLNQWVGLRNFTCPLCRHFLGSGFSMSVVNGDGGEALHVLFFKFSSFSNNSDERDNWWLR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01757 166 SMART ring_2 81 122 IPR001841 -
Accr9g01757 166 Pfam Ring finger domain 80 123 IPR001841 -
Accr9g01757 166 ProSiteProfiles Zinc finger RING-type profile. 81 123 IPR001841 -
Accr9g01757 166 PANTHER RING ZINC FINGER PROTEIN-RELATED 63 126 - -
Accr9g01757 166 SUPERFAMILY RING/U-box 67 127 - -
Accr9g01757 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 127 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01757 Accr-Chr9 38236505 38237005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01757 80 147 C3H Transcription Factor Family AT1G15100 50.000 2.16e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01757 K16282 - pcin:129296604 161.77