Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01756 ATGCTCTTCAACTACCTCAAACTAGCCTTGTCCCATTTCAAATGGGGTTTAGAGTTTCTTCTTTACCACCCATTTCATAGCCTTCGTCTTCATCATCATCAACCTCTTCATGAGATTCATCAGATCTTTACAGAAGAAGAACAAGTGGAGATATGGCATCCGCATGAAGGAGGAGGAGAAGAAGTGGATTGTGCAGTGTGTTGGAACAATATTGGTGAAGGAGATGAAGTTAGAGTGTTGAGATGTGAACATGTTTTTCATAGAGAATGTTTGAATCAATGGGTTGGTCTCAGGAACTTTACTTGTCCTCTTTGTAGGCACTTTTTGGGTTCTGGGTTTAGCATGTCTGTCGTAAATGGTGATGGAGGAGAAGCACTTCATGTGCTTTTCTTTAAGTTTTCTTCATTCTATGATAATTCTGATGAGCGTGATAACTGGTGGCTACGGTGA 450 0.4067 MLFNYLKLALSHFKWGLEFLLYHPFHSLRLHHHQPLHEIHQIFTEEEQVEIWHPHEGGGEEVDCAVCWNNIGEGDEVRVLRCEHVFHRECLNQWVGLRNFTCPLCRHFLGSGFSMSVVNGDGGEALHVLFFKFSSFYDNSDERDNWWLR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01756 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 110 IPR013083 -
Accr9g01756 149 SUPERFAMILY RING/U-box 63 110 - -
Accr9g01756 149 ProSiteProfiles Zinc finger RING-type profile. 64 106 IPR001841 -
Accr9g01756 149 PANTHER RING ZINC FINGER PROTEIN-RELATED 48 109 - -
Accr9g01756 149 Pfam Ring finger domain 63 106 IPR001841 -
Accr9g01756 149 CDD RING-H2 64 106 - -
Accr9g01756 149 SMART ring_2 64 105 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01756 Accr-Chr9 38223591 38224040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01756 63 130 C3H Transcription Factor Family AT1G15100 47.059 1.61e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01756 K16282 - pcin:129296604 191.43