Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01661 ATGGAGTTCAATCTACCAGAGACCTCTTCTCAACAAAAGAGAAAGCCCAAGAGGAAACGAAGCCGGGAAGACCCAGAGCTTGAACGCCTGAACTCATTGTCGTGGAACCCCTCTCTTTCTGAAAATGATGATGCTTTTTCTCTGGTTGTAGGCTCAAATGAACTTGAAGGAGGTTTCCTTTCACTGGAAGAGATTGATGAAGCTGAGTATGGTTTAGAAATTCCTGATCCCAAAGAAGACAAGAAGAAGAAGAAGTCTAAAAATAAAGCAGATTTGAAGAAACAGAAGCTAAGTGAAGTAGAGGGTGCCTGTAATGACGAGGTTGGGGTGAATTTTGAAGAAAATAAGGACGAGAGTGTGATGACTATAAAGAAGGAAAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGGAGGAGGAGGGGGAGGAAGCTGCTGATCAAGTTATTAATGTGAAAGATGCTAATGATGAAGAGGACATTGATGAAATGGAATTTTATGCATGGAATGAGTTGAGACTTCATCCTCTGCTCATGAAAGCAATTTACAAGCTTGGGTTCAAGGAACCCACGCCAATACAGAAAGCTTGTATTCCAGCTGCTGCTCATCAAGGGAAGGATGTTGTTGGGGCTTCTGAGACTGGATCTGGGAAAACTCTTGCCTTTGGTTTGCCCATTTTGCAACGCCTTTTAGAGGAGAGAGAGAAGGCTGCAAAGATGGTTGAACAAAGGGGTGAAGAACCTGACAAATATGCTACTTCTGGCATTCTAAGGGCTCTCATAATTGCTCCAACAAGGGAACTTGCGCTGCAGGTCACTGATCATCTGAAAGCAGTAGCCAAATATATCAATGTTAGGGTGACTCCTATAGTTGGGGGCATTTTGGCAGAAAAACAGGAGAGACTCTTAAAAGCGAGGCCGGAGATTATTGTTGGGACTCCAGGGAGGTTATGGGAACTTATGTCAGCTGGAGAAAAGCATCTTGTCGAGTTACATTCCTTGTCATTCTTTGTGCTTGATGAGGCTGATCGAATGGTACAAAGTGGACATTTTAAAGAGTTGCAGTCAATAATTGACATGCTTCCCATGCCCAACACGTCTGGTGCGGATGATCCTCAATCTCCACAAAATTGCATTACAATTTCAAGCTACCAAAGAAAGAAAAGACAAACTCTAGTCTTTTCGGCAACTGTTGCACTCTCTGCTGATTTTCGCAAGAAGCTAAAGCGTGCTTCAACAAAACAAAGTCAATCAGTGTTAGATGGATTCAATTCCATTGAAGCCCTGTCTGAACGTGCAGGAATGAGACCCAATGCAGCAGTGATTGATCTCACTAATCCAACAATATTGGCAGCCAAGCTAGAAGAATCATTTATTGAGTGCAAGGAAGAAGACAAAGATGCTTATCTGTACTATATTTTGACTGTCCATAGACAAGGCCGAACAATAGTATTCTGTACATCAATCGCTGCTTTGCGCCATATCTCTTCTCTACTGCGCATTCTTGGCATTAATGCTTGGACTCTTCATGCTCAAATGCAACAGCGAGCACGTTTCAAGGCTATTGATCGCTTTCGTGAGGATGAAAATGGCATACTTGTTGCTACTGATGTTGCAGCAAGGGGTCTTGATATTCCTGGTGTTAGGGCAGTTGTCCACTATCAGCTTCCACATTCAGCAGATGTTTATGTTCATAGAAGTGGAAGAACAGCTAGGGCTTCTGCCGAAGGGTGCAGCATTGCTTTGATCTCACCAAAAGATACAACAAAGTTTGCTTCATTGTGCAAATCCTTCTCCAAGGACACTTTTCAGCGATTTCCTTTAGAGAATTCATACATGCCAGAAGTTCTAAAGCGATTGTCTATTGCCCGTCAAATAGACAAAATAACACGAAAGGATTCACAGGAAAAAGCTCAGAAAAGCTGGTTTGAGCGGAATGCTGAATCAGTGGAGTTAGTGACGGAAAATTATGACAGTGAGGAGGAAAGAGTGAAGAAATTTAAGCAAATGAAAGCCAGCTCTGCTCAGTTGAAGAAGTTACAGCAGGAGCTCAATGCGCTTCTTTCACGCCCCTTACAATCAAAGCAATTTTCACATAGATACTTAGCAGGGGCGGGGGTCACTCCTCTGATGCAGGAACAATTCCAACAATTAACCAAGCAAAAGCAAGGAAGTGCAGGAGTAACTGGCAAGGGCAAATTGGTTGTGATTGGTCAAGATTGTGTAGAAGCACTTCAGGCTTTACGGAATGATGGTGAAGAGGTGCGTATGGACTTCAGGAAAATGACAGGAAAGAGGATGGAGAATTTGAAACGAAGGAGAAAAGAAGAGAAAAAACGTTTGCGTGACCAGCGAAGGAAGCAAAAGAGAAAGATGAAAATGGAGAATGAATAA 2388 0.4259 MEFNLPETSSQQKRKPKRKRSREDPELERLNSLSWNPSLSENDDAFSLVVGSNELEGGFLSLEEIDEAEYGLEIPDPKEDKKKKKSKNKADLKKQKLSEVEGACNDEVGVNFEENKDESVMTIKKEKKKKKKKKKKEEEGEEAADQVINVKDANDEEDIDEMEFYAWNELRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVVGASETGSGKTLAFGLPILQRLLEEREKAAKMVEQRGEEPDKYATSGILRALIIAPTRELALQVTDHLKAVAKYINVRVTPIVGGILAEKQERLLKARPEIIVGTPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVQSGHFKELQSIIDMLPMPNTSGADDPQSPQNCITISSYQRKKRQTLVFSATVALSADFRKKLKRASTKQSQSVLDGFNSIEALSERAGMRPNAAVIDLTNPTILAAKLEESFIECKEEDKDAYLYYILTVHRQGRTIVFCTSIAALRHISSLLRILGINAWTLHAQMQQRARFKAIDRFREDENGILVATDVAARGLDIPGVRAVVHYQLPHSADVYVHRSGRTARASAEGCSIALISPKDTTKFASLCKSFSKDTFQRFPLENSYMPEVLKRLSIARQIDKITRKDSQEKAQKSWFERNAESVELVTENYDSEEERVKKFKQMKASSAQLKKLQQELNALLSRPLQSKQFSHRYLAGAGVTPLMQEQFQQLTKQKQGSAGVTGKGKLVVIGQDCVEALQALRNDGEEVRMDFRKMTGKRMENLKRRRKEEKKRLRDQRRKQKRKMKMENE 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01661 795 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 451 612 IPR001650 -
Accr9g01661 795 PANTHER RNA HELICASE 129 720 - -
Accr9g01661 795 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 165 193 IPR014014 GO:0003724
Accr9g01661 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 360 IPR027417 -
Accr9g01661 795 Gene3D - 448 697 IPR027417 -
Accr9g01661 795 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 336 344 IPR000629 -
Accr9g01661 795 MobiDBLite consensus disorder prediction 71 97 - -
Accr9g01661 795 MobiDBLite consensus disorder prediction 1 43 - -
Accr9g01661 795 MobiDBLite consensus disorder prediction 762 795 - -
Accr9g01661 795 MobiDBLite consensus disorder prediction 124 145 - -
Accr9g01661 795 CDD DEADc_DDX24 176 441 - -
Accr9g01661 795 SMART ultradead3 184 424 IPR014001 -
Accr9g01661 795 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 197 414 IPR014001 -
Accr9g01661 795 Coils Coil 123 146 - -
Accr9g01661 795 Gene3D - 122 415 IPR027417 -
Accr9g01661 795 SMART helicmild6 491 572 IPR001650 -
Accr9g01661 795 Coils Coil 648 688 - -
Accr9g01661 795 MobiDBLite consensus disorder prediction 770 787 - -
Accr9g01661 795 Pfam Helicase conserved C-terminal domain 463 571 IPR001650 -
Accr9g01661 795 CDD SF2_C_DEAD 452 581 - -
Accr9g01661 795 MobiDBLite consensus disorder prediction 69 97 - -
Accr9g01661 795 Pfam DEAD/DEAH box helicase 189 397 IPR011545 GO:0003676|GO:0005524
Accr9g01661 795 Coils Coil 758 795 - -
Accr9g01661 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 256 586 IPR027417 -
Accr9g01661 795 Coils Coil 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01661 Accr-Chr9 35022091 35032269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01661 166 612 Eukaryotic Initiation Factors Gene Family AT5G11200 28.791 1.85e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01661 K14805 - gmx:100806018 1119.38