Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01657 ATGGACTCTTGGACTTATCTCTCAGAAGAAAAAGGCTCTTTGATTTCTGATGAGATGGATTTTTCGCTCGAAGCTTTTATGAGAGGCAAAAAAGGCAAAGAATCCTGTAACTTGGAGAGAGATGGATTTGGTCATAGCGTTGGGGAAGCTAAAAGCATGAAAGTTTTTGACCTGGGATTTCATGACTTGTTTCATAATGAGCTACATAGAAATCATAGTAAAAGAGTGGCTTCCTCTACCAATGTTATTTCCATGGATTCATCTTTTGCAGAACAAGAATCTCAGCCGATGTTTTTAGGTTCTCTAGTTGAATCTAAAAGTCCCAATATGTCATCACTGATTGATTTGAAGTTAGGGAGAATAGCAGACTGTAATAAAGATGCAAGTAGTGATAAAATTGCAAGGAGAGCTCGGTCTTCCGGCTCACCATCTCAAACACCTTTTTGTCAAGTTTATGGCTGTAACATGGATCTTAGCTTCTCAAAAGAGTATCACAAAAGGCATAGGGTTTGTGATGCTCACTCCAAGACAGCCAAAGTTATTGTTAATGGCATTGAGCAGAGGTTTTGTCAACAGTGTAGCAGGTTCCATTTGCTAGCTGAGTTTGATGATGGCAAGCGCAGTTGTCGCAGACGTCTAGCTGGACACAATCAACGCAGAAGGAAGCCTCAGTTTGATTACTTATCTGGTAAACCCTACAAGATGGTCCAGTTACGACAAGGGACCAAATGTATGGAGGCTTCATTTCAGAAGAAACCCCAGTTTGCCTCACAAGACATGATCAGTTGTGGCATTTTGTATGAACAAACCGATCTCAGCATCACTCCTCATGGGAGCTGTGCTCTCTCTCTTCTGTCAGTTCAGTTGCAGAACCCGCCATGCCACCTAGCAGGAAACCCGGGACCTAGTTCCCATGCTTGTCGCACCATCTGCGCGAACCTTAGTGACGAACGAGTTTCCAAAATAATACATTTGGGCACAAACCCTGTGGACAAGTATGAGCAAAATGAGTCATCACAACAACAACATGGACTGAGCTCCATGGAAGCTATCAAGAATGGATCCATATTGCTTTCTAATACTGATAATGCTCAAAGTCTTCAGGTTTGTCAAACATCAGAATTATTGGATACCAAACACTATGATTCACCTGAGGATGGAGCCACTGTTGATCTACTGCAATTGTCTTCACATCTTCAAAGGGTAGAGTTTCAAAGGAATTCATTTCTTCAATGTGGCCTTTGA 1245 0.4193 MDSWTYLSEEKGSLISDEMDFSLEAFMRGKKGKESCNLERDGFGHSVGEAKSMKVFDLGFHDLFHNELHRNHSKRVASSTNVISMDSSFAEQESQPMFLGSLVESKSPNMSSLIDLKLGRIADCNKDASSDKIARRARSSGSPSQTPFCQVYGCNMDLSFSKEYHKRHRVCDAHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNQRRRKPQFDYLSGKPYKMVQLRQGTKCMEASFQKKPQFASQDMISCGILYEQTDLSITPHGSCALSLLSVQLQNPPCHLAGNPGPSSHACRTICANLSDERVSKIIHLGTNPVDKYEQNESSQQQHGLSSMEAIKNGSILLSNTDNAQSLQVCQTSELLDTKHYDSPEDGATVDLLQLSSHLQRVEFQRNSFLQCGL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01657 414 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 96 338 IPR044817 GO:0003677
Accr9g01657 414 Pfam SBP domain 149 222 IPR004333 GO:0003677
Accr9g01657 414 SUPERFAMILY SBT domain 147 228 IPR036893 GO:0003677|GO:0005634
Accr9g01657 414 ProSiteProfiles Zinc finger SBP-type profile. 146 223 IPR004333 GO:0003677
Accr9g01657 414 FunFam Squamosa promoter-binding-like protein 14 140 210 - -
Accr9g01657 414 Gene3D - 139 210 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01657 Accr-Chr9 34868718 34874580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01657 114 407 SBP-box Gene Family AT1G69170 41.009 7.79e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Accr9g01657 SBP 9.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01657 - - pcin:129284403 546.584