Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01655 ATGGACCTGGAAGAGAAAGTGAGCCTGGACTTGGTTCAACCATCTGAACACTACTGCTATGTCCGTTGCAACTTCTGCAACACTGTGCTTGCGGTTGGGCTTCCATGCAAGAGGCTGCTGGACACAGTTACAGTGAAGTGTGGGCATTGTAGCAACCTGTCCTTCCTCAGCACCAGGCCTCCTCCTCCTCCGCATCACAACCACAACAACGAAACCCACCATCATCGTGATCATAAGAACACTATTGATCACACACTCACCCTTCAGGTGCAGGGGTTTTATGGTGATTACAAAAAGGGACAAGCATCATCGTCGTCGTCATCCTCCACCTCCTTAACTATGTTCAATGATCCAGGCTCCCCCAAGGCTGCACCTTTTGTTGTCAAACCTCCTGAGAAGAAACACCGACTTCCTTCGGCTTACAATCGCTTCATGAAAGAGGAGATACAGCGCATTAAAGCAACCAACCCTGAGATTCCTCATCGGGAAGCTTTCAGCGCTGCTGCAAAAAATGTAACACCATCACTTACTTACTTATTAGCTTCACACTATTATTCTTAG 561 0.4777 MDLEEKVSLDLVQPSEHYCYVRCNFCNTVLAVGLPCKRLLDTVTVKCGHCSNLSFLSTRPPPPPHHNHNNETHHHRDHKNTIDHTLTLQVQGFYGDYKKGQASSSSSSSTSLTMFNDPGSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKATNPEIPHREAFSAAAKNVTPSLTYLLASHYYS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01655 186 PANTHER PROTEIN YABBY 6-RELATED 13 172 IPR006780 GO:0007275
Accr9g01655 186 Pfam YABBY protein 14 171 IPR006780 GO:0007275
Accr9g01655 186 Gene3D High mobility group box domain 127 172 IPR036910 -
Accr9g01655 186 CDD HMG-box_SF 136 170 - -
Accr9g01655 186 SUPERFAMILY HMG-box 119 169 IPR036910 -
Accr9g01655 186 MobiDBLite consensus disorder prediction 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01655 Accr-Chr9 34833749 34835071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01655 1 171 C2C2-YABBY Transcription Factor Family AT1G69180 58.857 1.05e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Accr9g01655 YABBY 1.1e-53 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01655 K25796 - gmx:100795791 230.72