Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01643 ATGGAACCCAGATTGGGGTTTCCACTTCTCTTCTTCTTGTTATTCTCTCTCTGTTTCAAAGCAGAATCAAAATGTAACAAAGGGTGCGACCAAGCTCTTGCCTCCTACTATGTTTGGGTCGGATTTTCAAATCTCACGACCCTTTCGCAAATTATGCAATCCCCAATTCTTCAAAACCCTCAAGATATCGTTAACTATAACAAAGATCAACTATCTAGAATAGATTATGTTCAAACCACAACTCGCGTGAACGTTCCGTTCCCTTGCGAATGCATCGGCGGTGAATATCTAGGTTACGTATTCAAGTACCCGATTCAAGCAGGGGATAATTATGTGAAGGTTGCGAATCAGAGCTATTCGAATCTCACCACTGCTTCGTGGTTGCAGAGCTTGAATAGCTATCGGCCGAATAATTTTCCTAATTCTGGAACGCTGAATGTGACGGTGAACTGTTCGTGTGGGGATAGCCATGTTTCGAAAGATTATGGGTTGTTCATCACTTACCCGCTTAGAGCTGAGGATTCTTTGGATTCAATTGCGAACCAGACGAATCTTGATCGATCGTTGTTGCAGAGGTATAATCCTGGTGTTGATTTTAGCAAAGGGAGTGGTGTGGTTTATATCCCGGGGAAAGGCAAAAATGGTGCCTATTTGCCCCTGCCCACTAGTCCAAAAGGTACAAAAGGTATGGCTATTGCTGGAGCATCTGCTGGGGCAATAGTTGGGGTTCTGTTATTAACAGTTTGTCCTTATCTTGTGTATTACCAAAAGAAGAAGGAGGCAGAGGAAAAATTGCTTTCAGAATTAGCAGTATACTCTGCTCAATCTGATCCCAATGGTTCTTCAGCTGATGCTGTTGATACTAGCATCAAAGGCATTATTGTGGACAAATCAGTGGAGTTCTCATATGAAGAACTAGCTCAAGCTACAAATGACTTCAGTATGGAAAATAAAATTGGTCAAGGTGGTTTTGGGGCTGTCTACTATGCAGAGCTGAGAGGCGAGAAAGCTGCAATAAAAAAGATGGAGTCACAAAAATCAAGGGAGTTTCTTGCTGAATTGAAAGTGTTAACACATGTTTATCACCTAAACCTGGTGCGCTTGATTGGATATTGTGTTAAGAAGGATTCTCTTTTCCTTGTATATGAATATATTGACAATGGAAACTTAAGCCAACACCTGCGAGATGCAGGGAGAGAACCCTTGCCATGGTCCATTCGGGTGCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATATATTCACGAGCATACTGTGCCCGTATATATTCATCGTGACATAAAGTCAGCTAATATATTGATAAACCAAAACTTCCATGCCAAGGTTGCAGATTTTGGGTTGACAAGGCTCGCTGAGGTGGGAAGTTCAGCTCATCCCACTGATAATCTTGTAGGCACATTTGGTTATATGCCACCTGAATATGCATATGGTAGTGTCTCACCAAAAATTGACGTCTTCGCTTTTGGAGTTGTCCTCTATGAACTTATATCTGCTAAAGAAGCTTTGCTCAGAGCTGGTGAATCTGATTCTGATAGAAAAGGCCTTGTCTCTTTGTTTGAAGAAGCTCTTGAGAAGCCTAATCCAAAGGAACATCTTCAAAAGCTTGTTGATCCGAGACTTGGTGATCAATACACAATCGATTCAGTTTACAAGATTGCACAGCTAGCCAAAGTGTGCACAGATGGAGACCCAGACCGACGTCCGAGTATGAGATCTGTTGTGGTCACTCTGATGACACTTTCTTCCACTCCTTCGGAATGGGACATTGCCTCCTTGCATGAAAATTCAACATTCTCATATATGTTCCCCGCAAGGTAG 1839 0.4236 MEPRLGFPLLFFLLFSLCFKAESKCNKGCDQALASYYVWVGFSNLTTLSQIMQSPILQNPQDIVNYNKDQLSRIDYVQTTTRVNVPFPCECIGGEYLGYVFKYPIQAGDNYVKVANQSYSNLTTASWLQSLNSYRPNNFPNSGTLNVTVNCSCGDSHVSKDYGLFITYPLRAEDSLDSIANQTNLDRSLLQRYNPGVDFSKGSGVVYIPGKGKNGAYLPLPTSPKGTKGMAIAGASAGAIVGVLLLTVCPYLVYYQKKKEAEEKLLSELAVYSAQSDPNGSSADAVDTSIKGIIVDKSVEFSYEELAQATNDFSMENKIGQGGFGAVYYAELRGEKAAIKKMESQKSREFLAELKVLTHVYHLNLVRLIGYCVKKDSLFLVYEYIDNGNLSQHLRDAGREPLPWSIRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILINQNFHAKVADFGLTRLAEVGSSAHPTDNLVGTFGYMPPEYAYGSVSPKIDVFAFGVVLYELISAKEALLRAGESDSDRKGLVSLFEEALEKPNPKEHLQKLVDPRLGDQYTIDSVYKIAQLAKVCTDGDPDRRPSMRSVVVTLMTLSSTPSEWDIASLHENSTFSYMFPAR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01643 612 Pfam Protein tyrosine and serine/threonine kinase 314 583 IPR001245 GO:0004672|GO:0006468
Accr9g01643 612 Gene3D Phosphorylase Kinase; domain 1 279 384 - -
Accr9g01643 612 FunFam LysM receptor kinase 2 292 384 - -
Accr9g01643 612 Gene3D Transferase(Phosphotransferase) domain 1 385 603 - -
Accr9g01643 612 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 598 IPR044812 GO:0019199|GO:0045087
Accr9g01643 612 SMART serkin_6 313 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01643 612 SUPERFAMILY Protein kinase-like (PK-like) 291 584 IPR011009 -
Accr9g01643 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Accr9g01643 612 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Accr9g01643 612 ProSiteProfiles Protein kinase domain profile. 313 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01643 612 FunFam PTI1-like tyrosine-protein kinase 3 385 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01643 Accr-Chr9 34335414 34342257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01643 8 608 Receptor kinase-like Gene Family AT3G21630 54.146 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr9g01643 PK_Tyr_Ser-Thr 7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01643 K13429 - gmx:100803042 756.133