Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01543 ATGGAAGAGACAGACAACAAGCCCAATGCTAACAAGTTCATAACAAAAAGAAGCTTCAGAGGCGGAGCCAACAACCCTCATGAACATCATTATCATCATCACTATCATCATCTTCATCATCAGCATCAGCTTCTGCTAAAACAATACTCGACTCAGTTTGGGTTCTGTTACCAGAACGAGTATCAGAGGTACTACCCAGCTCTTCTTCCTCCACCTTCTCTTCTACCTCTGCAACTAGCTTTGACGACGCCGTCGTTCACTCAAAACCAAACCTTCAAATCGAAAAACCGTTCACAGAAGTCTCCATGCAAGCTCAATAATTCTCCCTTTGCTGCCTCGTCGTATAACGAAGTCTCAGTAGACACGGTTGCTCATGCTCCCAAGGAGTCTCCCCAGCAAGCCAAGGCGTCCCTTAAAGGAGATGATGAGAAGAAACTCACACCTGCAAGAAAAACACAGTCACTAGTTGCCGCAAGGAGGCCAGATTCCGGTGGCAAAGAGGGCTCTGTGATCTCTCTCCTTGCCAACCACTTTCTAGTCAAGTTTGATTCATCACAAGAAATATACCATTACAACGTTGAAATCACTCCCAATCCATCCAAGCAAGTTGCCCGAGTTATCAAAGAGAAGTTTGTTAATAATAATTGTGCTGTGCTTTCTGATGCTCATCCAGCATATGATGGGCATAAGAATCTTTATAGCTCTGTTGAATTCCAAAATGACAAGCTTGAGTTCTACGTAAGCCTGCCAATCCCTGTGAACAAGAGCTCATTACCTGATAGAGAAATGTGTGACTTGAAAGAGAGGCATGAACAGCTTAAACTGTTCAGAATAAATATAAAACTAGTCTCTAAGATCAATGGGAAGGAGTTGGTAAAATACTTGAGCAAAGACGAAGATGATTGGATTCCACTTCCACAGGATTATCTTCATGCTTTGGATGTAGTTCTGAGGGAGAGTCCAACTGAGAAGTGTATACCTGCAGGTAGGTCTTTCTATTCAACTTCAATGGGAAGAACGAAAGAGATTGGAGGAGGAGCTTCTGGGTTGAGAGGGTTCTTTCAGAGTCTTAGACCAACTCAACAAGGACTTGCCCTTAATGTTGATTTTTCTGTAACTGCTTTCCATGAAAGCATAGGAGTGATTCCGTACTTGCAGAAGCGTCTCGAGTTCCTTCGAGATCTTTCTCAAAGGAAGACAACAAGTTTAACTGGTGAACAGAGGAAAGGAGTGGAGAAGGCATTGAAGAACATCAGGGTCTTTGTTTGTCATAGAGAAACTGTTCAGAGATATCGCGTCTATGGCTTAACTGAGGAGGCTACGGCAAATCTTTGGTTTACTGATAGGGATGGAAAGAATCTGAGGCTTGTGAACTATTTTAAGGATCACTATAACTATGACATACAATTTAGTAAATTGCCATGCTTGCAAATTAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAGAAGTTCCTTGGAAAGCTTTCTGATGACCAAACTGCAAAAATACTCAAGATGGGATGCCAAAGACCAAGAGAACGAAAAGCCATCATTGAAGGAGTCATGAGGGGGCCTGTGGGGCCAACTAGTGGCAACCAGGAAAGAGAATTCAACCTCCAAGTATCAAGAGAAATGACTCGTTTATCTGGGAGGATTCTCCTTCCTCCCAAGCTAAAACTTGGGCATGGAGGTCATGTGACGAAGGTAGTTCCTTCTCGGCATGACCGCCAGTGGAACCTTCTGGATGGTCATGTCTTTGAGGGAACTAGAATTGAAAGGTGGGCATTAATAGGCTTTGGTGGAACACCTGAACAGAAATCCAATATCCCTAGATTTATAAGCCAGCTATCTCAAAGGTGTGAAGAAATGGGCATTTTTCTTAACAAGAACACAATTGTTAGCCCCCATTTTGAACCAGCCCAGGTTCTTAATAATGTCTCTCTTCTGGAATCTAAGCTTGAAAAAATCCAGAGAACTGCCTCGAACAATCTACAGCTGCTTATTTGTGTTATGGAGAGGAAACACAAAGGTTATGCAGACTTGAAAAGAATTGCAGAGACAAGTATTGGGGTTGTGAGCCAATGCTGCTTGTATCCAAATCTCAGCAAATTAAGCTCACAATTTTTGGCAAATTTGGCTCTCAAAATCAATGCCAAAGTTGGTGGATGCACTGTTGCTCTGTACAATTCACTTCCTTCTCAAATTCCACGGCTCTTCAAGTATGATGAACCAGCTATATTTATGGGTGCTGATGTAACTCATCCTCATCCACTTGATGATCATAGTCCATCGGTTGCTGCGGTTGTCAGCAGCATGAATTGGCCTACTGCGAACAAATATATTTCAAGAATAAGGTCGCAAACACACCGGCAAGAAATCATCCAGGATCTTGGTGCAATGGTGAAGGAGTTACTAGATGACTTCTATCAGGAGGTAAAGAAACTCCCTGGGAGAATAATTTTCTTTAGAGATGGGGTTAGTGAAACCCAATTCTATAAAGTTCTTCAAGATGAACTCCAATCCATCAAAGGGGCATGTTCTAGATTTCCCGGTTATAAACCATTCATTACTTTTGTAGTAGTACAAAAGAGGCATCACACAAGGTTGTTCCCCTGTGAAACTGATGATCAGTCGTCCACAAAAAATCTTAATCAATGTTATGAGAATATTCCACCAGGGACTGTGGTTGACTCCGTGATAACTCACCCGAAGGAGTTTGATTTCTACCTTTGCAGCCACTGGGGCATGAAAGGAACAAGCAGGCCAACTCATTACCATGTTTTGTGGGATGAAAACCTGTTTACTTCTGATGAACTCCAGAAACTGGTCTACAACCTATGCTATACTTTTGTTAGATGCACAAAGCCAATTTCTTTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCATACAGAGGCAGACTCTACCTTGACAGGTCAGATTTTTCCTCTGGTTTGTCTAAAGGTATCTCTTCATTGTCTAGAGCTGCACCTCCAAAGACAACACCTCTTCCAAAACTCAGTGAGAACATCAAGAAGCTCATGTTCTACTGCTAA 3081 0.4239 MEETDNKPNANKFITKRSFRGGANNPHEHHYHHHYHHLHHQHQLLLKQYSTQFGFCYQNEYQRYYPALLPPPSLLPLQLALTTPSFTQNQTFKSKNRSQKSPCKLNNSPFAASSYNEVSVDTVAHAPKESPQQAKASLKGDDEKKLTPARKTQSLVAARRPDSGGKEGSVISLLANHFLVKFDSSQEIYHYNVEITPNPSKQVARVIKEKFVNNNCAVLSDAHPAYDGHKNLYSSVEFQNDKLEFYVSLPIPVNKSSLPDREMCDLKERHEQLKLFRINIKLVSKINGKELVKYLSKDEDDWIPLPQDYLHALDVVLRESPTEKCIPAGRSFYSTSMGRTKEIGGGASGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTSLTGEQRKGVEKALKNIRVFVCHRETVQRYRVYGLTEEATANLWFTDRDGKNLRLVNYFKDHYNYDIQFSKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGPVGPTSGNQEREFNLQVSREMTRLSGRILLPPKLKLGHGGHVTKVVPSRHDRQWNLLDGHVFEGTRIERWALIGFGGTPEQKSNIPRFISQLSQRCEEMGIFLNKNTIVSPHFEPAQVLNNVSLLESKLEKIQRTASNNLQLLICVMERKHKGYADLKRIAETSIGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFKYDEPAIFMGADVTHPHPLDDHSPSVAAVVSSMNWPTANKYISRIRSQTHRQEIIQDLGAMVKELLDDFYQEVKKLPGRIIFFRDGVSETQFYKVLQDELQSIKGACSRFPGYKPFITFVVVQKRHHTRLFPCETDDQSSTKNLNQCYENIPPGTVVDSVITHPKEFDFYLCSHWGMKGTSRPTHYHVLWDENLFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLDRSDFSSGLSKGISSLSRAAPPKTTPLPKLSENIKKLMFYC 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01543 1026 SMART DUF1785_2 326 378 IPR014811 -
Accr9g01543 1026 Pfam Argonaute linker 1 domain 328 376 IPR014811 -
Accr9g01543 1026 MobiDBLite consensus disorder prediction 1 29 - -
Accr9g01543 1026 MobiDBLite consensus disorder prediction 125 166 - -
Accr9g01543 1026 ProSiteProfiles Piwi domain profile. 674 986 IPR003165 GO:0003676
Accr9g01543 1026 FunFam Protein argonaute 7 373 499 - -
Accr9g01543 1026 SUPERFAMILY PAZ domain 373 531 IPR036085 GO:0005515
Accr9g01543 1026 Gene3D paz domain 372 499 - -
Accr9g01543 1026 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 145 987 - -
Accr9g01543 1026 Pfam PAZ domain 389 511 IPR003100 GO:0005515
Accr9g01543 1026 SMART PAZ_2_a_3 386 526 IPR003100 GO:0005515
Accr9g01543 1026 CDD PAZ_argonaute_like 389 494 - -
Accr9g01543 1026 ProSiteProfiles PAZ domain profile. 386 495 IPR003100 GO:0005515
Accr9g01543 1026 Gene3D - 746 1026 IPR036397 GO:0003676
Accr9g01543 1026 Pfam Piwi domain 675 982 IPR003165 GO:0003676
Accr9g01543 1026 MobiDBLite consensus disorder prediction 135 149 - -
Accr9g01543 1026 Gene3D - 560 736 - -
Accr9g01543 1026 FunFam protein argonaute 10-like 743 1026 - -
Accr9g01543 1026 Pfam N-terminal domain of argonaute 171 317 IPR032474 -
Accr9g01543 1026 CDD Piwi_ago-like 543 985 IPR045246 -
Accr9g01543 1026 SMART Piwi_a_2 674 986 IPR003165 GO:0003676
Accr9g01543 1026 FunFam Argonaute 10 560 736 - -
Accr9g01543 1026 SUPERFAMILY Ribonuclease H-like 659 986 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01543 Accr-Chr9 30562451 30566132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01543 98 1026 Eukaryotic Initiation Factors Gene Family AT1G48410 40.082 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01543 K11593 - gmx:100797755 1646.33