Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01542 ATGAAGAAACATAGTGAAGAAGGAGAGAATAATATCAAGTGGCAAGAAGCAGTAGCCATGGCAGCTAGTCTTCTAAAAGCTCGAAGAACAGGAAAAAAGAGATTCATTGGGGTTCGTCAGAGACCTTCAGGGAGATGGGTAGCTGAAATAAAAGACACAATTCAGAACATAAGAGTTTGGTTGGGGACTTATGATACTGCAGAAGAAGCTGCAAGAGCCTATGATGAAGCTGCTTGCTTGCTTCGTGGAGCCAACACTCGCAGAAACTTCTGGCCTTCTCACTATAATTCGAACTCCCCAGCAAATAATCCAGTTCTTCCCAAAAAGATTGCTAATCTCATCCTTCTTCGGCTCAAAGCTCGAAACCTTGCTTCTTCTTGTCATCATTTTCCCAGTAACCAAACAAGCGAAGAAGATGAAGAAGAAGAAGAAGAAAAGCCAAAGACCGAGCTTGATCATTTTCTTGATGGGTTTGATGGTGGGGAATTTTGTAGTAGTGATTTTTCTTGTGATTTTCCCAGTAACAGCCAAATAGGTTTAGAAGAACCCTACCAGTTGAATAGCTTTCTAAAAGAGTCAGACAATAGTTTTCTCACAGATGTAGTCAGTTTTAGATCAGGAAACAAAACTAACTTGTTGGTTGAAGAAGTAGGGTTTAATGAAGAAAATCATGGGAAGGAGAAGAACATGGATGAGGAAAAGATTGATAGTGGGAGGGAAAAAGAAATTTTTGAGGAGGAATATTCTGATATGGGGTTCAGGGATTTTCAGTTTTTGGATAACTTGGGATCTATTTGTGCTTCTTCTCCATTTGTGGTAGCGGAAGAGATGATGGGGCCAATAATAATGGATCAGAAAGATGAAGAAGTATATGAAAATCATGATGAAGCATCCTTTCTAATAGAAAGTTTTAGGATGAAATATGAACGGAAATTCTCAGCTTGTCTTTATACCTACGGTGGAGTTTCTGAGTGCTTGAGGCTGCAATTTGGATTAGAAAATTTCTAA 1008 0.3909 MKKHSEEGENNIKWQEAVAMAASLLKARRTGKKRFIGVRQRPSGRWVAEIKDTIQNIRVWLGTYDTAEEAARAYDEAACLLRGANTRRNFWPSHYNSNSPANNPVLPKKIANLILLRLKARNLASSCHHFPSNQTSEEDEEEEEEKPKTELDHFLDGFDGGEFCSSDFSCDFPSNSQIGLEEPYQLNSFLKESDNSFLTDVVSFRSGNKTNLLVEEVGFNEENHGKEKNMDEEKIDSGREKEIFEEEYSDMGFRDFQFLDNLGSICASSPFVVAEEMMGPIIMDQKDEEVYENHDEASFLIESFRMKYERKFSACLYTYGGVSECLRLQFGLENF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01542 335 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Accr9g01542 335 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Accr9g01542 335 FunFam ethylene-responsive transcription factor RAP2-11 33 92 - -
Accr9g01542 335 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Accr9g01542 335 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
Accr9g01542 335 CDD AP2 33 90 IPR001471 GO:0003700|GO:0006355
Accr9g01542 335 Gene3D AP2/ERF domain 33 91 IPR036955 GO:0003700|GO:0006355
Accr9g01542 335 MobiDBLite consensus disorder prediction 127 147 - -
Accr9g01542 335 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Accr9g01542 335 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Accr9g01542 335 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 19 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01542 Accr-Chr9 30482708 30483715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01542 32 114 AP2-EREBP Transcription Factor Family AT5G19790 67.470 9.03e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr9g01542 AP2 4.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01542 K09286 - gmx:100793940 231.106