Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01540 ATGAGTGAGGTCTTCGAGGGTTACGAGCACCAATACTGTGACCTCTCTGCTAATCTTTCTCGTAAATGTGGCTCGGCGTCTCTTCTTTCTGACCAAGACCAGAAGCAGCAAGAAGTTGCTGAGATCAAAGCTGGATTAGATGATGCAGAAGCTCTGATTCGAAAGATGGATCTTGAGGCAAGAAGTTTGCAGGCAGGTGTGAAGGCAACGCTGCTTGCTAAGCTGAGGGAATACAATTCTGATCTGAACAAATTGAAGACGGAATTTACAAGGTTAACATCTCCTGATGCTGACCATGCCCGTGAAGATTTGCTAGAGGCGGGAATGGCCGATGCTCATCTGGCCTCAGCTGATCAGAGTGAAAGGCTAACTAAGTCAATAGAAAGAATAGATGAATCAAGCGACCAAATTAGGGAGAGTCAAAAAGTCATGCTGGAGACCGTTGGTGTTTCAATACTCGATGATTTGCATCAGCAACGTGAGACTCTCCTAAACTCCCATCAAAAGAAACAACTCATGGAAGAGAAGACTAACCAAGTTGTGCTTTTGGGAATTTGGCCAAGCGGCGCATGCGCAAGGGTTGCACTAGCGCTTAAACTTAAGGGCATACTTTACAAATACGTGGAGGAAGATTTAACAAATAAAAGTGAGTTGTTGCTGAAGAACAATCCTATCCACAAGAAGGTTCCAGTGCTCTTGCATAACGATAAGGCAATTGCTGAGTCACTTGTCATCTTGGAGTACATCGAGGAGACTTGGAGTCATACCCCAAATATTTTGCCTTGTGATCCTTATCAAAGGGCAAAAGTTCGCTTCTGGGTCAATTACTTTGATCAAAAGATCCGTCCAGCTATCAACCTTGTCTTCATATCTAAAGCAGAAGAAAGAAAGAAAGCAATTGAAAATCTGAATGAAATGATCAAAGATTTCTATGAAGGTGTGAAGAAAGATTTTGGGGAGGAATTCCCTTATTGTAAGGGTAAGTGTTTGGGACTACTGGACATTGTGGTGGGGACGAATGCAGGCAATTACAAGGTCATCAATGATGCTTTGGGAATGGAAGTGATTCATACTCACATAAACTCACAGTTCTTGTCTTGGATGGATGCCCTGAGGGAACATCCTCTTGTCAAGGACACACTGCCTCCTCATGATAAGTTTGTGGCCAAATTCAGAGGGAAATTTGGTCCTATCAACTAA 1200 0.4317 MSEVFEGYEHQYCDLSANLSRKCGSASLLSDQDQKQQEVAEIKAGLDDAEALIRKMDLEARSLQAGVKATLLAKLREYNSDLNKLKTEFTRLTSPDADHAREDLLEAGMADAHLASADQSERLTKSIERIDESSDQIRESQKVMLETVGVSILDDLHQQRETLLNSHQKKQLMEEKTNQVVLLGIWPSGACARVALALKLKGILYKYVEEDLTNKSELLLKNNPIHKKVPVLLHNDKAIAESLVILEYIEETWSHTPNILPCDPYQRAKVRFWVNYFDQKIRPAINLVFISKAEERKKAIENLNEMIKDFYEGVKKDFGEEFPYCKGKCLGLLDIVVGTNAGNYKVINDALGMEVIHTHINSQFLSWMDALREHPLVKDTLPPHDKFVAKFRGKFGPIN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01540 399 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 263 395 IPR010987 -
Accr9g01540 399 Gene3D - 1 98 IPR038407 -
Accr9g01540 399 FunFam Vesicle transport through interaction with t-SNAREs homolog 1A 1 100 - -
Accr9g01540 399 SUPERFAMILY Thioredoxin-like 179 281 IPR036249 -
Accr9g01540 399 CDD SNARE_Vti1 128 169 - -
Accr9g01540 399 Coils Coil 68 88 - -
Accr9g01540 399 Gene3D Glutaredoxin 177 259 - -
Accr9g01540 399 FunFam Tau class glutathione S-transferase 173 261 - -
Accr9g01540 399 Pfam Snare region anchored in the vesicle membrane C-terminus 128 169 - -
Accr9g01540 399 CDD GST_C_Tau 264 393 IPR045074 GO:0004364|GO:0006749
Accr9g01540 399 SFLD Main.3: Omega- and Tau-like 176 393 IPR045073 -
Accr9g01540 399 SUPERFAMILY t-snare proteins 6 93 IPR010989 GO:0016020|GO:0016192
Accr9g01540 399 CDD GST_N_Tau 180 253 - -
Accr9g01540 399 SUPERFAMILY SNARE fusion complex 130 169 - -
Accr9g01540 399 SUPERFAMILY GST C-terminal domain-like 251 394 IPR036282 -
Accr9g01540 399 Coils Coil 32 52 - -
Accr9g01540 399 Gene3D - 260 395 - -
Accr9g01540 399 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 183 388 IPR045073 -
Accr9g01540 399 Gene3D - 117 176 - -
Accr9g01540 399 SFLD Glutathione Transferase (cytosolic) 176 393 IPR040079 -
Accr9g01540 399 Pfam Glutathione S-transferase, N-terminal domain 180 250 IPR004045 -
Accr9g01540 399 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 178 257 IPR004045 -
Accr9g01540 399 Pfam Vesicle transport v-SNARE protein N-terminus 12 91 IPR007705 GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01540 Accr-Chr9 30382577 30388701 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01540 173 394 Glutathione S-transferase Gene Family AT1G74590 42.667 5.15e-60 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01540 K00799 K08493 qsa:O6P43_025459 281.952