Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01523 ATGGGTAGGTCACCTTGCTGTGAGAAAGTAGGGTTGAAGAGAGGACCTTGGACTCCTGAAGAAGACCAGAAGCTCGTCGCCTACATTGAACAACATGGCCATGGAAGCTGGCGTGCTTTGCCTTCCAAAGCTGGACTTGAGAGATGTGGGAAAAGTTGCAGACTGAGGTGGACTAATTATCTCAGACCTGATATTAAACGAGGAAAGTTCAGCTTGCAAGAAGAGAGGACCATTATTCAACTTCATGCTCTTCTTGGAAACAGATGGTCAGCCATAGCGGCTCACTTGCCTAAGAGAACTGACAATGAGATCAAGAACTACTGGAACACTCATCTCAAGAAGAGGCTCGCCAAAATGGGAATCGACCCGACCACACACCGGCCTAAAGTTGACGCCGGCGGACTGGGGAGCTCGAGCCTTAGCCACATGGCTCAGTGGGAGAGTGCCCGGCTTGAAGCCGAAGCCAGGCTTGTCAGAGAGTCCAAGCTCCAGCTCGGTTCGTCATCGTCTTTATTCCCCAGCGCTAAACCGGCTCGGCTCGTCCTTAACAGAATCTTGGCTCGGCCGTCCGTACCGCCGTGCTTAGACGTGCTCAAAGCATGGCAGAACTCATGGACGTCGTTGCCGACCGCAGAAGACAAAAATACCAGAATGCATAGCATGTACGCCCTGATGCTCGCGGCCGCTGACGACAACCTTGAGTCGCCTACGTCCACCTTGAGCTTCCCGGACCCCATATTACCGCCTAGCTCCGCTACCACAGCCATCACAGCCACTGCAGGAATATTACCCATTAGTGAAAAAATCGTCATCCCTCCGACCACCAACACTACCGCGGTTAATTCTGTCCACGCACCCACTTCAGGAATCGACCCGTGGGACACCGAGGAGGGGGTCACCGGAGAAAGAAGAACGATCACGACAAATTTACAAGACGATGACATTATGGTGGCAGTGGAGGCATTTATGGGAGAAAGGTACAAGAACGTACAAGTCAATTTACAAGAAGTACTGGCGTCAAACAATCTAATGGCTGGTTTAAGCAGCGAAGACAACGATGATGTGCTTGTTTTTGAATCCGATGAGAATATGGATAACTTGGGTTTCGTGGATATTAATGGCGAAGCAACTATGAATTGTGGAAACACAAACTTTGAGGAGAAGAATCATTACTGGAACAGCATATGTAATACCCAAACTTGGGGATTATAA 1212 0.4983 MGRSPCCEKVGLKRGPWTPEEDQKLVAYIEQHGHGSWRALPSKAGLERCGKSCRLRWTNYLRPDIKRGKFSLQEERTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLAKMGIDPTTHRPKVDAGGLGSSSLSHMAQWESARLEAEARLVRESKLQLGSSSSLFPSAKPARLVLNRILARPSVPPCLDVLKAWQNSWTSLPTAEDKNTRMHSMYALMLAAADDNLESPTSTLSFPDPILPPSSATTAITATAGILPISEKIVIPPTTNTTAVNSVHAPTSGIDPWDTEEGVTGERRTITTNLQDDDIMVAVEAFMGERYKNVQVNLQEVLASNNLMAGLSSEDNDDVLVFESDENMDNLGFVDINGEATMNCGNTNFEEKNHYWNSICNTQTWGL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01523 403 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 206 - -
Accr9g01523 403 CDD SANT 69 112 IPR001005 -
Accr9g01523 403 Gene3D - 14 66 - -
Accr9g01523 403 CDD SANT 16 61 IPR001005 -
Accr9g01523 403 SMART sant 13 63 IPR001005 -
Accr9g01523 403 SMART sant 66 114 IPR001005 -
Accr9g01523 403 Gene3D - 69 116 - -
Accr9g01523 403 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr9g01523 403 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr9g01523 403 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr9g01523 403 FunFam MYB transcription factor 69 116 - -
Accr9g01523 403 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr9g01523 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr9g01523 403 FunFam MYB-related transcription factor 13 66 - -
Accr9g01523 403 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr9g01523 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01523 Accr-Chr9 29511471 29513676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01523 1 249 MYB Transcription Factor Family AT3G01140 60.232 5.76e-100 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr9g01523 Myb_DNA-binding 2.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01523 K09422 - gmx:100809025 442.195