Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01517 ATGGAGACTGGATCAGCAAGAGGCTCTGATCTTCCCCCAGGCTTCAGATTTCACCCCACGGACGAGGAATTAATCGTCCATTACCTCTGTAACCAAGCCACCTCCAAGCCTTGCCCTGCTTCTATCATCCCTGAAGTTGATATCTACAAGTTTGATCCCTGGCAGTTACCTGAGAAGGCAGTGTTTGGCGAGAGTGAGTGGTATTTCTTTACCCCAAGGGACAGGAAGTACCCAAATGGGGTGAGGCCAAACAGGGCCACTGTGTCTGGGTACTGGAAGGCCACTGGAACAGACAAGGCAATTTACAGTGCGGGCAAGCACATTGGGGTGAAGAAAGCTCTGGTTTTTTACAAAGGCAGGCCACCAAAAGGTGTCAAAACCGATTGGATCATGCATGAGTATCGTCTCATTGGTTCACCAAGACGAGCCAACAAGCATATTGGATCCATGCGATTGGATGATTGGGTGCTTTGTAGAATTTACAAGAAGAAGAACATGGCAAAATCAATGGACCTACTAAAGGAGGAAATAATGATGGAGGAAAATCAATACCCAAGTCCTGAAATGAACAACATAACAGAAGATAACAAGATGCCCAATCTTGTCTGTGAGCAGCAACAAATGGCTTTCGAGGTCCCAGATCAGTACTATGCAACATCATCTTCAACCAGCCAGTATTTGTGA 684 0.4635 METGSARGSDLPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWQLPEKAVFGESEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSAGKHIGVKKALVFYKGRPPKGVKTDWIMHEYRLIGSPRRANKHIGSMRLDDWVLCRIYKKKNMAKSMDLLKEEIMMEENQYPSPEMNNITEDNKMPNLVCEQQQMAFEVPDQYYATSSSTSQYL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01517 227 ProSiteProfiles NAC domain profile. 11 163 IPR003441 GO:0003677|GO:0006355
Accr9g01517 227 FunFam NAC transcription factor 20 167 - -
Accr9g01517 227 Pfam No apical meristem (NAM) protein 12 136 IPR003441 GO:0003677|GO:0006355
Accr9g01517 227 PANTHER NAC TRANSCRIPTION FACTOR 56 11 187 - -
Accr9g01517 227 SUPERFAMILY NAC domain 7 163 IPR036093 GO:0003677|GO:0006355
Accr9g01517 227 Coils Coil 163 183 - -
Accr9g01517 227 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01517 Accr-Chr9 29384382 29385747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01517 9 198 NAC Transcription Factor Family AT1G69490 69.072 1.08e-97 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr9g01517 NAM 4.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01517 - - pcin:129322687 359.762