Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01511 ATGGCTCACATCGGGTTGCTCGTCGCCGCAATGGCTTTTCTCACGGTGGTTTCCCCCGCCCATGGCTACGGCGGAGGGTGGACCAACGCCCACGCCACCTTCTATGGGGGAAGTGACGCGTCAGGGACAATGGGTGGTGCTTGTGGGTATGGGAATTTGTACAGCCAGGGTTATGGAACAAACACAGCTGCTCTGAGCACAGCTCTGTTCAACAATGGCCTGAGCTGTGGTTCTTGCTTTGAGATTAAGTGTGCCAATGATGCTAAATGGTGCCTCCCTGCTTCCATTGTGGTCACAGCCACCAATTTCTGTCCTCCAAACAATGCCTTGCCCAACAATGCCGGTGGCTGGTGCAACCCTCCCCTCCAACACTTTGACCTCGCCCAGCCCGTCTTCCTCCGCATTGCCCAGTACCGAGCCGGAATTGTCCCGGTGGCCTACCGGAGGGTGCCCTGTAGGAGAAAGGGAGGTATCAGGTTCACAGTCAATGGACACTCCTACTTCAACCTGGTCCTCATCACCAACGTGGGCGGCGCTGGAGATGTTAATGCAGTGGCTGTGAAAGGGTCAAGAACCGGCTGGATGCCCATGTCAAGGAACTGGGGACAAAATTGGCAAAGCAACAACTACCTTAACGGACAAAGCCTGTCGTTTAAGGTCACAACCAGTGATGGTCGCACTGTGGTGTCTAATAACGTTGCTCCGGCAGGCTGGTCCTTTGGCCAAACCTTCACTGGGGCTCAGTTTCACTAA 753 0.5511 MAHIGLLVAAMAFLTVVSPAHGYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCFEIKCANDAKWCLPASIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLAQPVFLRIAQYRAGIVPVAYRRVPCRRKGGIRFTVNGHSYFNLVLITNVGGAGDVNAVAVKGSRTGWMPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSNNVAPAGWSFGQTFTGAQFH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01511 250 SUPERFAMILY PHL pollen allergen 154 246 IPR036749 -
Accr9g01511 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 246 IPR007117 -
Accr9g01511 250 SUPERFAMILY Barwin-like endoglucanases 26 175 IPR036908 -
Accr9g01511 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 157 IPR007112 -
Accr9g01511 250 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Accr9g01511 250 PRINTS Expansin signature 168 189 IPR002963 GO:0009664
Accr9g01511 250 PRINTS Expansin signature 96 106 IPR002963 GO:0009664
Accr9g01511 250 PRINTS Expansin signature 156 168 IPR002963 GO:0009664
Accr9g01511 250 PRINTS Expansin signature 232 248 IPR002963 GO:0009664
Accr9g01511 250 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Accr9g01511 250 PRINTS Expansin signature 203 224 IPR002963 GO:0009664
Accr9g01511 250 PRINTS Expansin signature 115 132 IPR002963 GO:0009664
Accr9g01511 250 PRINTS Expansin signature 132 145 IPR002963 GO:0009664
Accr9g01511 250 Pfam Lytic transglycolase 62 147 IPR009009 -
Accr9g01511 250 FunFam Expansin 157 249 - -
Accr9g01511 250 Pfam Expansin C-terminal domain 158 235 IPR007117 -
Accr9g01511 250 SMART dpbb_1 62 147 IPR007112 -
Accr9g01511 250 FunFam Expansin 17 153 - -
Accr9g01511 250 CDD DPBB_EXPA_N 26 152 - -
Accr9g01511 250 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Accr9g01511 250 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Accr9g01511 250 PRINTS Expansin/Lol pI family signature 140 156 IPR007118 GO:0005576
Accr9g01511 250 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Accr9g01511 250 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Accr9g01511 250 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Accr9g01511 250 PANTHER EXPANSIN-A15 10 249 IPR002963 GO:0009664
Accr9g01511 250 Gene3D - 12 153 IPR036908 -
Accr9g01511 250 Gene3D - 156 250 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01511 Accr-Chr9 29196080 29197047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01511 1 250 Expansin Gene Family AT2G03090 81.275 1.31e-154 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01511 - - gmx:100527059 467.618