Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01507 ATGCAAAACCAAAGCATGCATTTGGTTCTTTCCTCTGATGCCAAGCCAAGGCTTAAATGGACTCCTGAGCTTCATCAACGATTCCTAGATGCTGTTAACCAGCTTGGAGGGGCTGAAAAGGCAACCCCAAAGAGTCTTATGAGGGTGATGGGGATTCCAGGACTTACCTTGTACCACCTGAAGAGCCATTTACAGAAATTGAGACTTGGGAAAAGCCCTCAGCCAGAAGCCTCGTATGATGATAAACAAGAAGATTATAGAGAAGACCAAAGCAGTGATGGTCATTGCAGCAGGGAAACCACTGTGGGGACCAAGAATCAGATGACGGAAACCCAGCAGATTGCTCAAGCTCTCCAACTACAAATGGAAGTGCAGAGGAAGCTTTATGAACAAATTGAGGTGCAGAGACATTTGCAGCTTCGGATCGAAGCTCAAGGGAAGTACTTACAATCAGTGCTATTAAAAGCTCAGGAAGCACTTGCAGGCTACTATCCTTCTGCTGCAGGTATAGAACATGCAAAAGCTGAGCTCTCTCAATTAGTCTCAATAATTAACAATCGCGGCCCAAGTTCGCCCATCTCAGAACTGACAGAAACCGGAGTTTTGAGCTTGAAAGAAGGAAGAGAAAGGAAGCAAAGCAGAGGGACCATGTGTTCATTGGAGAGTTCCTTGACATCTTCTGAAAGCTCAGGGACAAAGAAGGAGGAAGAGGAGCCTCTCAAGTCTAACAGAACTTCAGTTGAACTGAAATTGATGACTGTTCACCCAGAAGAAGATAATAAAGATTTGAATGGTGAATCAAAGAATCAAGCTTGTGGGAGAAAAAGAAGTGGAACCACTGATTCTGATGGTTGCTGTGTAGAGCAACCAATAAACAAAAGATGCAGCAACTGGTTCAGGAAACATGAGTCACCTGAATTGCTTGATTTGAACAGTCAGTATCACAGTGACACTGACTCAGACTCAGACCATAATAGACTTGAATTGCAGTTCAACTCAGAGTTTTAG 1008 0.4385 MQNQSMHLVLSSDAKPRLKWTPELHQRFLDAVNQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKLRLGKSPQPEASYDDKQEDYREDQSSDGHCSRETTVGTKNQMTETQQIAQALQLQMEVQRKLYEQIEVQRHLQLRIEAQGKYLQSVLLKAQEALAGYYPSAAGIEHAKAELSQLVSIINNRGPSSPISELTETGVLSLKEGRERKQSRGTMCSLESSLTSSESSGTKKEEEEPLKSNRTSVELKLMTVHPEEDNKDLNGESKNQACGRKRSGTTDSDGCCVEQPINKRCSNWFRKHESPELLDLNSQYHSDTDSDSDHNRLELQFNSEF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01507 335 Gene3D - 14 72 - -
Accr9g01507 335 MobiDBLite consensus disorder prediction 270 286 - -
Accr9g01507 335 NCBIfam myb-like DNA-binding domain, SHAQKYF class 15 70 IPR006447 GO:0003677
Accr9g01507 335 FunFam Myb family transcription factor 14 72 - -
Accr9g01507 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 260 IPR044848 GO:0003700
Accr9g01507 335 MobiDBLite consensus disorder prediction 230 244 - -
Accr9g01507 335 MobiDBLite consensus disorder prediction 75 95 - -
Accr9g01507 335 MobiDBLite consensus disorder prediction 316 335 - -
Accr9g01507 335 MobiDBLite consensus disorder prediction 69 107 - -
Accr9g01507 335 MobiDBLite consensus disorder prediction 186 289 - -
Accr9g01507 335 SUPERFAMILY Homeodomain-like 14 69 IPR009057 -
Accr9g01507 335 Coils Coil 115 135 - -
Accr9g01507 335 Pfam Myb-like DNA-binding domain 17 67 IPR001005 -
Accr9g01507 335 MobiDBLite consensus disorder prediction 251 269 - -
Accr9g01507 335 MobiDBLite consensus disorder prediction 309 335 - -
Accr9g01507 335 Pfam MYB-CC type transfactor, LHEQLE motif 113 158 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01507 Accr-Chr9 28842310 28843789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01507 6 294 G2-like Transcription Factor Family AT1G69580 50.667 2.48e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr9g01507 Myb_DNA-binding 3.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01507 - - pcin:129321718 524.628