Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01505 ATGGCTTCTGAACCCGATGCGTCAGAGATTTCTGCAGTGTTCGAAAGAATGGTGAGAAATAGAGACCTGACTCTGTTTCTCCCCTTTATCTTTGGCTTATCAAATGCTGCTTCCAGAAGAGAGGGTGAAGACTCAAGTCCGGAAAATGAGAATGAAGAAAGTGCCCAGCGTGAGAGGATTATCTTGATCAACCCCTTCACACAGGGTATGGTGGTGATCGATGGTGCTTCGAGCCTTGAGGCTCTGCTTCGTGATTTCGGTAGAGGCAAGGGTGGGCGGCCTCCAGCTTCCAAAGAATCCATAGATGCTTTGCCATGTTTTAAAATCGAGGAAGGTGATGAGGGAGAGTGTGTGATTTGCTTGGAGGAGTGGGAAGCTGGTGGGGAAGTGAAAGAGATGCCTTGTAAGCATAAATTTCATCCCAATTGTGTAGAGAAGTGGTTGGGCATTCATGGGTCTTGTCCAGTTTGTAGGTATGAAATGCCTATTGATGAAGAAACTGGAAAGAAGAGAGATGAAGAAGACGGGGAAGAGAGGAGGAGAAGGATTGGGAGAGAAGTTTGGGTTAGTTTCTCTTTCAATGGTGAAGGAAGAAGAAATGAAAACTCAAATCAAGCTCCTTCAGATGATTCCAATGATTCTTGA 645 0.4543 MASEPDASEISAVFERMVRNRDLTLFLPFIFGLSNAASRREGEDSSPENENEESAQRERIILINPFTQGMVVIDGASSLEALLRDFGRGKGGRPPASKESIDALPCFKIEEGDEGECVICLEEWEAGGEVKEMPCKHKFHPNCVEKWLGIHGSCPVCRYEMPIDEETGKKRDEEDGEERRRRIGREVWVSFSFNGEGRRNENSNQAPSDDSNDS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01505 214 MobiDBLite consensus disorder prediction 194 214 - -
Accr9g01505 214 Pfam Ring finger domain 116 158 IPR001841 -
Accr9g01505 214 SMART ring_2 117 157 IPR001841 -
Accr9g01505 214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 164 IPR013083 -
Accr9g01505 214 FunFam E3 ubiquitin-protein ligase RNF181 86 164 - -
Accr9g01505 214 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 49 162 - -
Accr9g01505 214 MobiDBLite consensus disorder prediction 195 214 - -
Accr9g01505 214 SUPERFAMILY RING/U-box 107 164 - -
Accr9g01505 214 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01505 Accr-Chr9 28838481 28839125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01505 1 199 C3H Transcription Factor Family AT1G26800 54.412 3.93e-69 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01505 - - pcin:129321278 332.798