Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01500 ATGGAAGAGAGAAATGATTCTGAAAAGCTTGATGAAGTCATGCTTCCAGGGTTCAGATTTCACCCAACCGATGAGGAGCTTGTTGGGTTCTATCTCAAGAGAAAGATTCAGCAGAGGCCTCTCTCTATAGAGCTCATAAAGCAGCTTGATATCTATAAATATGACCCATGGGATCTTCCGAAGTTGGCAAGCACAGGTGAGAAAGAGTGGTATTTTTATTGCCCAAGAGACAGAAAGTACAGAAACAGTGCGAGGCCAAATAGGGTAACAGGAGCTGGGTTCTGGAAAGCCACAGGTACCGATAGGCCCATATATTCCTCTGAGGGTTCAAAGTGCATTGGGTTGAAGAAATCTCTTGTCTTCTATAAAGGAAGAGCTGCCAAAGGAGTCAAAACTGACTGGATGATGCATGAGTTCAGATTACCTTCTCTCTCTGACTCTTCCTCTTCACCAAAAAAGTTCTCAGAAAGAACCATCCCTGCTAATGATTCGTGGGCAATCTGCAGAATATTCAAGAAGACAAACTCGACAGCCCAAAGAGCTCTCTCTCATTCCTGGGTCTCTCCCTTACCTCATGAAATGAACGCTTCTGAGCTGCTAACCAAAGGCGGAGACACTTCAAAGTTTTGTTCAGATCATAACAACATTTCGTCACTGACAAAGAAAACTAGCTTACCCAACCAGTTGTTCTGTACCAACCAAAACGACCCCTTAAACTCCACCACCACTTGCCCTTCAGATATTGCCTCTTACAAACCCATGCTTAACCCATTGTTGTTTTACAAACCCTTTGACCAACTACCCTTCATTTCATCAAATAACTCAGACCTTGTGTTTTCATCATCCCCCCTTGAACCATGCAGTGCTAAAGTCTCCACCATGGACATTTCCTCCATGTTACTGAGCATGTCATCATCTTCTGTGCTTGGAGACTTTAGCAGTAAGTCTTCATCAGAGGCTGCAAACTTTGGAGGGTTTCAAGATCAGTACAGCACTAATTCTGGGTATTCACCATCAATAACTTTACCAGTAATACACGACGGGAATGGACTGGTGAAGATGAATCACCCTAGCACTAATCTGAATGTGAATGTGGTAATCCCTAGAGTGATGGAAGAGCCAGATCACATGAATATGCATGAAGCATGGAAGTCAAACCTGCTTTGGGATAGCTCATCTTGTCCCTGTGATCACGTGCCCTCCACTTGTTCTACTACTACCAAGTGCTATACTTAG 1236 0.4369 MEERNDSEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSDSSSSPKKFSERTIPANDSWAICRIFKKTNSTAQRALSHSWVSPLPHEMNASELLTKGGDTSKFCSDHNNISSLTKKTSLPNQLFCTNQNDPLNSTTTCPSDIASYKPMLNPLLFYKPFDQLPFISSNNSDLVFSSSPLEPCSAKVSTMDISSMLLSMSSSSVLGDFSSKSSSEAANFGGFQDQYSTNSGYSPSITLPVIHDGNGLVKMNHPSTNLNVNVVIPRVMEEPDHMNMHEAWKSNLLWDSSSCPCDHVPSTCSTTTKCYT 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01500 411 FunFam NAC domain-containing protein 35 23 176 - -
Accr9g01500 411 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Accr9g01500 411 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
Accr9g01500 411 SUPERFAMILY NAC domain 13 173 IPR036093 GO:0003677|GO:0006355
Accr9g01500 411 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Accr9g01500 411 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01500 Accr-Chr9 25842122 25843536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01500 1 314 NAC Transcription Factor Family AT1G26870 58.434 7.26e-113 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr9g01500 NAM 4.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01500 - - pcin:129284476 592.423