Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01490 ATGATCGACGATGAACTTGACTCCATGTTCTGGGGACTGGTCAGGGAAGCAAAGTCCAAAATGTGGAACTTCTGGACCAAGGGTTGCATTTATCTGGTGTGTATTTCTGCAATTTCTGGGGCTTTGGCTCAGGAACCCGAACTCGGATCTACCCGTGTGGTCTTTCAGACGAATTACGGGGATATTGAATTCGGTTTCTTTCCCACAGTTGCGCCCAAAACCGTTGATCACATTTTTAAACTTATACGACTTGGATGCTATAACACAAATCATTTTTTCCGGGTAGATAAGGGCTTTGTGGCCCAAGTAGCGGATGTTATGGGTGGAAGATCCGCTCCCATGAATGAAGAACAAAAAAGAGAAGCTGAAAAGACTGTTGTTGGTGAATTTAGCCAAGTCAAACATGTTAGAGGCATTCTTTCTATGGGAAGGTATGATGATCCAGACAGTGGTGGATCCTCATTTTCAATGCTTCTAGGAGATGCTCCTCATCTTGACGGTCAGTATGCAATATTTGGAAAAGTCACTAAAGGTGATGATATGTTGCGAAAGCTTGAGGAACTACCTACTCGTAAAGAGGGGATATTTGTTATGCCAACGGAGCGTATTACTATTCTGTCATCCTATTACTACGACACAGAGAGAGAAGATTGCGAGCGAGACAGATCGATTCTGAAGCGCAGGCTGACTGCTTCAGCTGTTGAAATCGAAAGACAGAGGATGAAGTGCTTCCCCTGA 738 0.4417 MIDDELDSMFWGLVREAKSKMWNFWTKGCIYLVCISAISGALAQEPELGSTRVVFQTNYGDIEFGFFPTVAPKTVDHIFKLIRLGCYNTNHFFRVDKGFVAQVADVMGGRSAPMNEEQKREAEKTVVGEFSQVKHVRGILSMGRYDDPDSGGSSFSMLLGDAPHLDGQYAIFGKVTKGDDMLRKLEELPTRKEGIFVMPTERITILSSYYYDTEREDCERDRSILKRRLTASAVEIERQRMKCFP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01490 245 SUPERFAMILY Cyclophilin-like 52 215 IPR029000 -
Accr9g01490 245 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 53 207 IPR002130 GO:0000413|GO:0003755
Accr9g01490 245 Gene3D - 41 218 IPR029000 -
Accr9g01490 245 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 54 210 IPR002130 GO:0000413|GO:0003755
Accr9g01490 245 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 81 IPR002130 GO:0000413|GO:0003755
Accr9g01490 245 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 IPR002130 GO:0000413|GO:0003755
Accr9g01490 245 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 104 IPR002130 GO:0000413|GO:0003755
Accr9g01490 245 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 167 182 IPR002130 GO:0000413|GO:0003755
Accr9g01490 245 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 26 245 IPR044233 -
Accr9g01490 245 CDD cyclophilin 54 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01490 Accr-Chr9 25040919 25045611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01490 53 211 U-box Gene Family AT5G67530 28.144 2.62e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01490 - - pcin:129321584 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01490 9 25040919 25045611 Accr9g01490 9 25040919 25045611 ECH