Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01487 ATGGCTTTCTTCCCGGCAAATTTCATGCTTCAAACCTCTCACCCAGAAGAGCATCATCATCATCCTCATCACCAGCCTCCTCCTTCTCTCAACTCGCTCCTGACTTCATGTGCTCCACAAGATTATCATCATCATGGGGGGCCTCCTTTTCTAGGTAAGAGATGCATGTCATTTTCAGGAATTGAACTGGGTGAGGAAGCTAATAATGCCGAGGAGGACTTATCGGATGACGGGTCTCAGGCGGGGGAGAAGAAGAGGAGGCTTAACATGGAACAGGTGAAGACACTTGAGAAGAGCTTTGAGCTGGGGAATAAGCTTGAACCAGAGAGAAAAATGCAGCTCGCAAGGGCTCTAGGATTGCAGCCGAGACAGATCGCGATATGGTTCCAGAACAGAAGAGCAAGGTGGAAAACAAAGCAGCTTGAGAAAGACTATGATGTCCTTAAAAGACAATATGATTCCCTCAAGGCAGATAATGATGCTCTTCAAGCTCAGAACCAAAAACTCCAAGCTGAGATATTTGCATTGAAGAACCGAGAGCCGACCGAGTCGATCAACCTCAACAAAGAAACAGAGGGATCTTGCAGCAACAGAAGCGAGAACAGCTCTGAGATTATCAAGTTTGATATAACAAGAACACCAGCTATTGATGATGATAGCCCTGATCTTTCCACACACCACCAAACCACAAGCATAACATTTTTTCCTTCTTCTTCTGCTTCAGTAAGGCCTCCTCCTCCTTCTTCAGGAGGAGGAGGAGGAGGAGTGGCCCACCAGCTCTTCCAAGCTTCTTCAACAAGACCAGAGCTTCATCAATGCCACCCGAAGGTAACCGATCAGATGGTTAAAGAAGAGAATAATTTGAGCAATATGTTTTGTGGGATGGATGATCAATCTGGATTCTGGCCATGGTTGGAGCACCAACATTTCAATTGA 936 0.4605 MAFFPANFMLQTSHPEEHHHHPHHQPPPSLNSLLTSCAPQDYHHHGGPPFLGKRCMSFSGIELGEEANNAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQYDSLKADNDALQAQNQKLQAEIFALKNREPTESINLNKETEGSCSNRSENSSEIIKFDITRTPAIDDDSPDLSTHHQTTSITFFPSSSASVRPPPPSSGGGGGGVAHQLFQASSTRPELHQCHPKVTDQMVKEENNLSNMFCGMDDQSGFWPWLEHQHFN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01487 311 MobiDBLite consensus disorder prediction 14 36 - -
Accr9g01487 311 CDD homeodomain 84 140 IPR001356 GO:0003677
Accr9g01487 311 PRINTS Lambda-repressor HTH signature 119 135 IPR000047 GO:0003677
Accr9g01487 311 PRINTS Lambda-repressor HTH signature 110 119 IPR000047 GO:0003677
Accr9g01487 311 SMART HOX_1 82 143 IPR001356 GO:0003677
Accr9g01487 311 MobiDBLite consensus disorder prediction 66 87 - -
Accr9g01487 311 SUPERFAMILY Homeodomain-like 77 141 IPR009057 -
Accr9g01487 311 MobiDBLite consensus disorder prediction 225 239 - -
Accr9g01487 311 ProSitePatterns 'Homeobox' domain signature. 114 137 IPR017970 GO:0000981|GO:0006355
Accr9g01487 311 ProSiteProfiles 'Homeobox' domain profile. 79 139 IPR001356 GO:0003677
Accr9g01487 311 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 70 261 IPR045224 GO:0003700
Accr9g01487 311 Pfam Homeobox associated leucine zipper 139 179 IPR003106 GO:0006355|GO:0043565
Accr9g01487 311 FunFam Homeobox-leucine zipper protein ATHB-13 76 143 - -
Accr9g01487 311 Pfam Homeodomain 84 137 IPR001356 GO:0003677
Accr9g01487 311 MobiDBLite consensus disorder prediction 206 258 - -
Accr9g01487 311 Gene3D - 76 145 - -
Accr9g01487 311 Coils Coil 131 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01487 Accr-Chr9 24887064 24888405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01487 1 311 Homeobox Transcription Factor Family AT1G69780 60.252 7.33e-118 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr9g01487 Homeodomain 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01487 K09338 - gmx:100808033 421.009