Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01480 ATGGCCAAGAGACGTCTTTCCTTCTCTCATTTCTTTACACTTCTGTTCATCATTTTCCCGCCATGTGTGTCGGTAAGGATAGAAACAGAGTCTCTCCTTCAGTTCAAGAAGCATTTGAAGGACCCTTTGGATTCTTTAGCCTCCTGGACAGATTCAGAGTCTCCCTGTGAATTTGACGGAGTTACTTGTGATAGTTTCTCTGGGAAAATCATAGAAATTTCGCTGGAAAATAGGTCCCTTTCTGGGGAGATTTTCCCATCTATTTTTGCTCTACAGAACCTTCGAGTTCTGTCACTAGCATCAAATTTTATTTCTGGGAAGCTTCCATATGAAATAAGCAATTGCAGCAGCCTTAGAGTTTTGAACGTAACAGAAAATGAGATGGTTGGGGTTTTGCCAGACTTGTCTGGGATGAGAAATCTCAAAGTTCTTGACCTCTCTGCAAATTACTTTTCCGGGAAATTTCCAAGCTGGGCCGGAAATCTGACCGGTCTAGTTTCGCTGGGGCTCGGGGAAAATGAGTATGCTGAGAGTGAAATTCCTGAGACTCTTGGCAATCTGAAGAACTTGACTTGGCTCTATCTTGGTGGTTCACATTTGCGAGGAGAGATTCCTGAATCCATTTATGAAATGAGGGCTCTGGAGACACTGGATATTTCCAGAAACATGATCTCTGGGAAACTCTCCAAGTCAATTTGGAAGTTGCAAAATCTTTGTAAGATTGAGCTTTTCTCAAACAATTTAACTGGGCAAATCCCAGCTGAGCTAGCAAACTTGACGAAGCTTGAGGAGATTGACATTTCTATGAACCATCTGTATGGTAAATTGCCAGAGGTGATTGGTAGTATGAAGAATTTGGTTGTTTTTCAACTCTATGAAAACAACTTTTCTGGAGAACTTCCTTCTGGTTTTGGAGATATGCAACATCTTGTTGGATTCTCAATTTATCGAAACAGCTTCTCGGGGAAAATTCCAGAAAATTTTGGCCGATTCTTGCCGCTGGAGAGCATTGATATTTCAGAAAATCAATTTTCAGGTGATTTTCCAAGGTTCTTGTGTGAAAACAGAAAGTTGAAATTTTTGCTTGCTTTGCAAAATAATTTCTCAGGTGAATTGCCTGAGACTTATGTTACATGTAAATCATTGGAGAGATTCAGGGTCAGCAGGAATAGCTTGTCTGGAAAAATCCCAAATGAACTGTGGGCACTTCCATTTGTAAAGATAATTGATTTGGCTGACAATAATTTTGATGGTGAAATATCCCCAAAAATTGGGCTTTCTTCTAGCTTAAGCCAGTTAGTTCTAACAAAGAACAAATTTTCGGGTAAGCTTCCTTCGCAACTTGATAAGCTGACGAATTTGGAGAAGCTATATTTGAGCAACAACAATTTCTATGGTGAAATACCAGCTGAAATTGGAGCTTTGAAGCAATTATCCTCTTTTCATCTAGAAGATAATTCATTAACTGGATCAATACCTGCAGAACTTGGCAATTGCGCAAGGCTAGTAGACTTGAATCTTGCTCGGAATCTTCTAACTGGCACGATCCCTCAGTCATTTTCACTTATGAGCTCATTGAACTCTCTTAACCTATCCGGCAACAAACTTACAGGCCCAATCCCAGAAAGCTTAGTATCAATGAAATTGAGCTCAATTGATTTTTCTGAAAACCAGTTGTCTGGGAGGATCCCGAACAATCTTCTAATTATTGGTGGTGGTGAAGCTTTTGTTGGAAACCCAGGACTTTGTGTTGAACAAAATTCAAGAACGCTCATGAATTCTGAATTCAACATTTGCACGAACACGCATGGTCAGAGAAGGGTCATCACTGATAAGATAGTAATTCTCTGTGTCATTGCTTCTGTCTTGGTTGTAGTGTTGACTGTGTTGCTTCTGAGTTACGGAAGCTTCAAGTATGAAAAAGCAGACCTGGAGAAAAACTTGCAAGATCAAAAGGAAACAGATTCAAAATGGAAAATTGCTTCTTTCCACCAAGTTGATCTTGATGTGAACGAAATATGCAATTTGGATGAAGATAATTTGATCGGAACTGGTGGTACTGGAAAGGTATATCGAATTGACTCGAAGAAAAATGGTTCCACGGTGGCCGTAAAACAACTATGGAAAGGAGATGGTGTGAAAATTTTGGCTGCAGAAATGGAGACTTTGGGGAAAATCAGGCATAGAAATATACTTAAGCTTTATGCTTGTTTGTTTAAAGGAGGATCAAGCTATTTAGTGTTAGAGTACATGCCAAATGGTAATCTTTTTCACGCTCTTCACAGACAGATAAAGGGTGGGAAACCAGAATTGGATTGGTACCAGAGATATAAAATTGCATTGGGCACTGCAAAAGGAATTGCCTATTTACATCATGATTGTTCTCCACCTATCATTCACAGAGACATAAAATCCAGTAACATTTTGCTCGATGAGGATTATGAGGCAAAAATTGCTGATTTTGGGGTTGCAAAATTTGCAGAAAAAACTGATCAACAGTTGGGTTTTAGCTGTCTTGCCGGTACTCATGGTTATATTGCTCCTGAGCATGCTTATACACGCGAAGTCAGCGAAAAGAGTGATGTGTATAGCTTCGGAGTGGTGTTGCTAGAATTACTGACAGGAAGGGAACCCATTGAAGAGGATTACGGCGAAGGGAAGGATATCGTGAATTGGGTTATGACTAATCTTGATAACCGTGAAAGCGCTATAAAGATCCTTGATGATAAAATAGTATCTGAGTCAACTGAAGATGAAATGATCAAGGTCTTGAAGGTTGCTATCCACTGCACAACTAAGCTCCCTTCTTTGCGCCCTACGATGAGAGATGTTGTGAAGAAGCTTATCGATGCTGATTCTAGCCCTTTTCAATCTCCAAGCAGCGATTTTGAGAAAGATGTTGAGGGTTTTATCTAG 2916 0.3988 MAKRRLSFSHFFTLLFIIFPPCVSVRIETESLLQFKKHLKDPLDSLASWTDSESPCEFDGVTCDSFSGKIIEISLENRSLSGEIFPSIFALQNLRVLSLASNFISGKLPYEISNCSSLRVLNVTENEMVGVLPDLSGMRNLKVLDLSANYFSGKFPSWAGNLTGLVSLGLGENEYAESEIPETLGNLKNLTWLYLGGSHLRGEIPESIYEMRALETLDISRNMISGKLSKSIWKLQNLCKIELFSNNLTGQIPAELANLTKLEEIDISMNHLYGKLPEVIGSMKNLVVFQLYENNFSGELPSGFGDMQHLVGFSIYRNSFSGKIPENFGRFLPLESIDISENQFSGDFPRFLCENRKLKFLLALQNNFSGELPETYVTCKSLERFRVSRNSLSGKIPNELWALPFVKIIDLADNNFDGEISPKIGLSSSLSQLVLTKNKFSGKLPSQLDKLTNLEKLYLSNNNFYGEIPAEIGALKQLSSFHLEDNSLTGSIPAELGNCARLVDLNLARNLLTGTIPQSFSLMSSLNSLNLSGNKLTGPIPESLVSMKLSSIDFSENQLSGRIPNNLLIIGGGEAFVGNPGLCVEQNSRTLMNSEFNICTNTHGQRRVITDKIVILCVIASVLVVVLTVLLLSYGSFKYEKADLEKNLQDQKETDSKWKIASFHQVDLDVNEICNLDEDNLIGTGGTGKVYRIDSKKNGSTVAVKQLWKGDGVKILAAEMETLGKIRHRNILKLYACLFKGGSSYLVLEYMPNGNLFHALHRQIKGGKPELDWYQRYKIALGTAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEAKIADFGVAKFAEKTDQQLGFSCLAGTHGYIAPEHAYTREVSEKSDVYSFGVVLLELLTGREPIEEDYGEGKDIVNWVMTNLDNRESAIKILDDKIVSESTEDEMIKVLKVAIHCTTKLPSLRPTMRDVVKKLIDADSSPFQSPSSDFEKDVEGFI 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01480 971 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Accr9g01480 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Accr9g01480 971 SUPERFAMILY RNI-like 274 565 - -
Accr9g01480 971 FunFam leucine-rich repeat receptor-like protein kinase TDR 751 959 - -
Accr9g01480 971 FunFam Receptor-like protein kinase HSL1 287 592 - -
Accr9g01480 971 Gene3D Ribonuclease Inhibitor 280 366 IPR032675 -
Accr9g01480 971 Pfam Protein kinase domain 678 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01480 971 Gene3D Ribonuclease Inhibitor 24 176 IPR032675 -
Accr9g01480 971 ProSitePatterns Protein kinases ATP-binding region signature. 682 705 IPR017441 GO:0005524
Accr9g01480 971 SMART serkin_6 676 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01480 971 Gene3D Phosphorylase Kinase; domain 1 659 750 - -
Accr9g01480 971 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 212 948 - -
Accr9g01480 971 SUPERFAMILY Protein kinase-like (PK-like) 672 948 IPR011009 -
Accr9g01480 971 FunFam Probable inactive receptor kinase RLK902 25 182 - -
Accr9g01480 971 FunFam Leucine-rich receptor-like protein kinase family protein 666 750 - -
Accr9g01480 971 CDD STKc_IRAK 682 948 - -
Accr9g01480 971 Gene3D Transferase(Phosphotransferase) domain 1 751 964 - -
Accr9g01480 971 Gene3D Ribonuclease Inhibitor 367 467 IPR032675 -
Accr9g01480 971 Gene3D Ribonuclease Inhibitor 468 591 IPR032675 -
Accr9g01480 971 ProSiteProfiles Protein kinase domain profile. 676 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01480 971 Pfam Leucine rich repeat 501 559 IPR001611 GO:0005515
Accr9g01480 971 SUPERFAMILY L domain-like 52 361 - -
Accr9g01480 971 FunFam Leucine-rich repeat receptor protein kinase EMS1 204 286 - -
Accr9g01480 971 Gene3D Ribonuclease Inhibitor 177 279 IPR032675 -
Accr9g01480 971 SMART LRR_typ_2 138 162 IPR003591 -
Accr9g01480 971 SMART LRR_typ_2 187 211 IPR003591 -
Accr9g01480 971 SMART LRR_typ_2 91 115 IPR003591 -
Accr9g01480 971 SMART LRR_typ_2 259 283 IPR003591 -
Accr9g01480 971 SMART LRR_typ_2 451 475 IPR003591 -
Accr9g01480 971 SMART LRR_typ_2 523 547 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01480 Accr-Chr9 24543793 24547391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01480 13 962 Receptor kinase-like Gene Family AT1G72180 57.456 0.0 1080
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr9g01480 Pkinase 6.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01480 - - pcin:129322843 1677.92