Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr9g01468 | ATGCAAAATATGAACCAGAGGCAGCATCAGCAATACAAGGAAGAATCCAAGAAGAAGGAGCGTCACATTGTCTCTTGGAGTCAAGAGGAGGATGATATACTTAGAGAGCAGATTAGCATTCATGGAACAGACAATTGGACAATTATTGCATCTAAATTCAAGGATAAAACGACAAGACAATGCAGGAGGAGGTGGTACACATACTTGAATTCTGATTTCAAGAAAGGAGGATGGTCACCAGAGGAAGATATGCTATTATGTGAGGCTCAGAAGATTTTTGGCAACCGATGGACAGAAATAGCTAAGGTGGTTTCAGGCAGAACGGATAACGCTGTGAAAAATCGGTTCACCACACTATGCAAAAAGAGAGCAAAATATGAAGCTTTGGCCAAAGAGAACAACCCTTCATTCATCAATTCAAATAACAAAAGGATCATTTTCCAACAAGTTTACAGTACAAATGCAGTGTCAGAGGTTGCAGCATCCATTAAGAAGATGAGGGCCCACATCCCTGATGATGCAGCAAGGATCACCTATGGAGACAGATCACATAAACAATTTGGAACACCAGTTAGCCAGCAACCAAGAGTGCCATTTGCAGTATTATCTAATTTCAACGATAACAGCTTGCTAGATCGACGTCCTATCTGCAGTGCTAAGTTCAATAGTTACGCCCAAAACAACAAGCCTCAAGGAACATTCCTCAAAAAGGATGATCCAAAGATCAGTGTGTTGATGCAGCAAGCAGAATTATTAAGTTCACTTGCAGTGAAAGTTAATACAGAGAACGTGGACCAGAGTCTTGAGAATGCATGGAAGGTTCTGCAAGACTTTCTGAACCGAACAAACAAATCAGATCTTTCAAGACATAAGATCACAGATTTACAGCTTGAAAATCTCAAAAATATGGCGGAGGACATAAAGAGTGGTCATGAGGGGAGCCAACCATATACAAGGCAGCCAGAGCTATATGAGGAGTCTCCAAGCAGCTCTGAATATAGTACAGGATCAACTATACTGGGCCATTCAGATGATGATGATTTGGAGCATTCACTGCATCAAAATGTTGGAACTGAAGGGAAGCGTACAGAAATTGGGGGAAAAAAAGGAATTAGTAGTTGCGGGAAACTGTGTGCTTCAACTGCGGATCAAGATATCTTGCCATCTTCTGACGAACAGATAGATGACGATTTCATCATTTCCGCCTTGTCAAGTGCAGAGTTCAGTTCCCCTATTCAGGTTACCCCTCTGTTCAGATCGTTGGCTGCAGGAATTCCCAGCCCACAGTTTTCAGAAAGTGAAAGGAACTTTCTGATGAAAACACTGGGAATGGAATCCCCATCTCAGAATCAAAGTGCAAAAGCCTCTCAGCCGCCACCCTGCAAAAGAGCCTTACTACAAAGTCTATAA | 1410 | 0.4206 | MQNMNQRQHQQYKEESKKKERHIVSWSQEEDDILREQISIHGTDNWTIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFTTLCKKRAKYEALAKENNPSFINSNNKRIIFQQVYSTNAVSEVAASIKKMRAHIPDDAARITYGDRSHKQFGTPVSQQPRVPFAVLSNFNDNSLLDRRPICSAKFNSYAQNNKPQGTFLKKDDPKISVLMQQAELLSSLAVKVNTENVDQSLENAWKVLQDFLNRTNKSDLSRHKITDLQLENLKNMAEDIKSGHEGSQPYTRQPELYEESPSSSEYSTGSTILGHSDDDDLEHSLHQNVGTEGKRTEIGGKKGISSCGKLCASTADQDILPSSDEQIDDDFIISALSSAEFSSPIQVTPLFRSLAAGIPSPQFSESERNFLMKTLGMESPSQNQSAKASQPPPCKRALLQSL | 469 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr9g01468 | 469 | CDD | SANT | 78 | 119 | IPR001005 | - | |
Accr9g01468 | 469 | Gene3D | - | 76 | 146 | - | - | |
Accr9g01468 | 469 | ProSiteProfiles | Myb-like domain profile. | 25 | 69 | IPR001005 | - | |
Accr9g01468 | 469 | MobiDBLite | consensus disorder prediction | 442 | 457 | - | - | |
Accr9g01468 | 469 | MobiDBLite | consensus disorder prediction | 10 | 24 | - | - | |
Accr9g01468 | 469 | CDD | SANT | 25 | 69 | IPR001005 | - | |
Accr9g01468 | 469 | SMART | sant | 22 | 71 | IPR001005 | - | |
Accr9g01468 | 469 | SMART | sant | 74 | 122 | IPR001005 | - | |
Accr9g01468 | 469 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Accr9g01468 | 469 | FunFam | Transcription factor MYB124 | 18 | 74 | - | - | |
Accr9g01468 | 469 | Pfam | Myb-like DNA-binding domain | 26 | 86 | - | - | |
Accr9g01468 | 469 | PANTHER | MYB PROTEIN-RELATED | 25 | 250 | - | - | |
Accr9g01468 | 469 | FunFam | Transcription factor MYB124 | 77 | 145 | - | - | |
Accr9g01468 | 469 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 74 | 124 | IPR017930 | - | |
Accr9g01468 | 469 | MobiDBLite | consensus disorder prediction | 442 | 469 | - | - | |
Accr9g01468 | 469 | ProSiteProfiles | Myb-like domain profile. | 70 | 120 | IPR001005 | - | |
Accr9g01468 | 469 | MobiDBLite | consensus disorder prediction | 308 | 343 | - | - | |
Accr9g01468 | 469 | SUPERFAMILY | Homeodomain-like | 23 | 116 | IPR009057 | - | |
Accr9g01468 | 469 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 18 | 73 | IPR017930 | - | |
Accr9g01468 | 469 | Gene3D | - | 11 | 74 | - | - | |
Accr9g01468 | 469 | MobiDBLite | consensus disorder prediction | 313 | 341 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr9g01468 | Accr-Chr9 | 24162671 | 24167487 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr9g01468 | 12 | 319 | MYB Transcription Factor Family | AT2G02820 | 59.683 | 3.95e-126 | 368 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Accr9g01468 | Myb_DNA-bind_6 | 3.7e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr9g01468 | K09422 | - | gmx:100807667 | 627.476 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Accr9g01468 | 9 | 24162671 | 24167487 | Accr9g01468 | 9 | 24162671 | 24167487 | ECH |