Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01468 ATGCAAAATATGAACCAGAGGCAGCATCAGCAATACAAGGAAGAATCCAAGAAGAAGGAGCGTCACATTGTCTCTTGGAGTCAAGAGGAGGATGATATACTTAGAGAGCAGATTAGCATTCATGGAACAGACAATTGGACAATTATTGCATCTAAATTCAAGGATAAAACGACAAGACAATGCAGGAGGAGGTGGTACACATACTTGAATTCTGATTTCAAGAAAGGAGGATGGTCACCAGAGGAAGATATGCTATTATGTGAGGCTCAGAAGATTTTTGGCAACCGATGGACAGAAATAGCTAAGGTGGTTTCAGGCAGAACGGATAACGCTGTGAAAAATCGGTTCACCACACTATGCAAAAAGAGAGCAAAATATGAAGCTTTGGCCAAAGAGAACAACCCTTCATTCATCAATTCAAATAACAAAAGGATCATTTTCCAACAAGTTTACAGTACAAATGCAGTGTCAGAGGTTGCAGCATCCATTAAGAAGATGAGGGCCCACATCCCTGATGATGCAGCAAGGATCACCTATGGAGACAGATCACATAAACAATTTGGAACACCAGTTAGCCAGCAACCAAGAGTGCCATTTGCAGTATTATCTAATTTCAACGATAACAGCTTGCTAGATCGACGTCCTATCTGCAGTGCTAAGTTCAATAGTTACGCCCAAAACAACAAGCCTCAAGGAACATTCCTCAAAAAGGATGATCCAAAGATCAGTGTGTTGATGCAGCAAGCAGAATTATTAAGTTCACTTGCAGTGAAAGTTAATACAGAGAACGTGGACCAGAGTCTTGAGAATGCATGGAAGGTTCTGCAAGACTTTCTGAACCGAACAAACAAATCAGATCTTTCAAGACATAAGATCACAGATTTACAGCTTGAAAATCTCAAAAATATGGCGGAGGACATAAAGAGTGGTCATGAGGGGAGCCAACCATATACAAGGCAGCCAGAGCTATATGAGGAGTCTCCAAGCAGCTCTGAATATAGTACAGGATCAACTATACTGGGCCATTCAGATGATGATGATTTGGAGCATTCACTGCATCAAAATGTTGGAACTGAAGGGAAGCGTACAGAAATTGGGGGAAAAAAAGGAATTAGTAGTTGCGGGAAACTGTGTGCTTCAACTGCGGATCAAGATATCTTGCCATCTTCTGACGAACAGATAGATGACGATTTCATCATTTCCGCCTTGTCAAGTGCAGAGTTCAGTTCCCCTATTCAGGTTACCCCTCTGTTCAGATCGTTGGCTGCAGGAATTCCCAGCCCACAGTTTTCAGAAAGTGAAAGGAACTTTCTGATGAAAACACTGGGAATGGAATCCCCATCTCAGAATCAAAGTGCAAAAGCCTCTCAGCCGCCACCCTGCAAAAGAGCCTTACTACAAAGTCTATAA 1410 0.4206 MQNMNQRQHQQYKEESKKKERHIVSWSQEEDDILREQISIHGTDNWTIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFTTLCKKRAKYEALAKENNPSFINSNNKRIIFQQVYSTNAVSEVAASIKKMRAHIPDDAARITYGDRSHKQFGTPVSQQPRVPFAVLSNFNDNSLLDRRPICSAKFNSYAQNNKPQGTFLKKDDPKISVLMQQAELLSSLAVKVNTENVDQSLENAWKVLQDFLNRTNKSDLSRHKITDLQLENLKNMAEDIKSGHEGSQPYTRQPELYEESPSSSEYSTGSTILGHSDDDDLEHSLHQNVGTEGKRTEIGGKKGISSCGKLCASTADQDILPSSDEQIDDDFIISALSSAEFSSPIQVTPLFRSLAAGIPSPQFSESERNFLMKTLGMESPSQNQSAKASQPPPCKRALLQSL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01468 469 CDD SANT 78 119 IPR001005 -
Accr9g01468 469 Gene3D - 76 146 - -
Accr9g01468 469 ProSiteProfiles Myb-like domain profile. 25 69 IPR001005 -
Accr9g01468 469 MobiDBLite consensus disorder prediction 442 457 - -
Accr9g01468 469 MobiDBLite consensus disorder prediction 10 24 - -
Accr9g01468 469 CDD SANT 25 69 IPR001005 -
Accr9g01468 469 SMART sant 22 71 IPR001005 -
Accr9g01468 469 SMART sant 74 122 IPR001005 -
Accr9g01468 469 MobiDBLite consensus disorder prediction 1 24 - -
Accr9g01468 469 FunFam Transcription factor MYB124 18 74 - -
Accr9g01468 469 Pfam Myb-like DNA-binding domain 26 86 - -
Accr9g01468 469 PANTHER MYB PROTEIN-RELATED 25 250 - -
Accr9g01468 469 FunFam Transcription factor MYB124 77 145 - -
Accr9g01468 469 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Accr9g01468 469 MobiDBLite consensus disorder prediction 442 469 - -
Accr9g01468 469 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Accr9g01468 469 MobiDBLite consensus disorder prediction 308 343 - -
Accr9g01468 469 SUPERFAMILY Homeodomain-like 23 116 IPR009057 -
Accr9g01468 469 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 73 IPR017930 -
Accr9g01468 469 Gene3D - 11 74 - -
Accr9g01468 469 MobiDBLite consensus disorder prediction 313 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01468 Accr-Chr9 24162671 24167487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01468 12 319 MYB Transcription Factor Family AT2G02820 59.683 3.95e-126 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr9g01468 Myb_DNA-bind_6 3.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01468 K09422 - gmx:100807667 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01468 9 24162671 24167487 Accr9g01468 9 24162671 24167487 ECH