Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01452 ATGGAGCTTGCAACTGTAAAAACGGAATTCTACCCAAGAAAACATAGGATGTTCACGATGGAAGGTGGGAATATTGACACAAAGTGCATGAAAAGGCGGCGAAGAGACTTATCGGTGACAGTTTTAGAGGACAATGAGAAACAAGAGCAACCACAGCAGGGTGTTCAATCAAATACTACTACTGTCAAGAAAAGCTCAAGACATAGATGGACAGGGAGATATGAAGCTCATTTATGGGACAAAGGGACTTGGAATCCAACTCAAAAGAAGAAAGGGAAGCAAGGAGCTTATGCTGAAGAAGAAGCTGCTGTTAGAGCATATGATTTGGCTGCACTCAAGTATTGGGGAACTTCTACCTTCACAAACTTCCCTGTATCTAATTATCAGAACGAGATTGAGATAATGAAAACTATGACAAAAGAAGAATATATTGCTTCTTTAAGAAGAAGAAGCAGTGGCTTTTCCAGAGGAGTATCAAAGTACAGAGGAGTAGCAAGGCACCATCACAATAGGAGGTGGGAAGCAAGAATAGGGAGAGTGTTTGGTGACAAGTACCTCTACCTTGGCACTTACAGTACGCAAGAAGAGGCTGCTCGTGCATATGATATAGCAGCTATAGAATACAGAGGCTTGAACGCAGTAACAAACTTTGATTTGAGCACATATATTAGATGGCTAAGGCCTGAAGCCCTTAATACTACTCCTCAAGAACAACAAAAGAACCCAGAATTACACAATCTCATGACGAACCCTAGCTTCACCCAAACCAGAGAAATCGCTGAGGTACCCAAGTTCAATCGGAATCCAAAGGAGCAAGACATACCTCAGTATTCAACCCCTTTATGTTATAGTAATAGGGCCAATTCATCGTCTTCTCCGACAGCATTAGGGCTTCTGCTGCAATCGTCAGTGTTCAGAGAGCTAATGCAGAAAAATATGAATCAGGGAAAAATTGAAGAAGAACAAGAAGAAGGAAGTAATCGGTTTGCTTACTTGTACTCTTCCCATGGCAATAGAATACCAAATTTACAGTTACCGGAAGAGAAAGCTTTGCCGCCACAGCATCATAGAACTGGTCAATCTGTATGGGATGAGTGCTTTCAACGAATCTGA 1113 0.4169 MELATVKTEFYPRKHRMFTMEGGNIDTKCMKRRRRDLSVTVLEDNEKQEQPQQGVQSNTTTVKKSSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYAEEEAAVRAYDLAALKYWGTSTFTNFPVSNYQNEIEIMKTMTKEEYIASLRRRSSGFSRGVSKYRGVARHHHNRRWEARIGRVFGDKYLYLGTYSTQEEAARAYDIAAIEYRGLNAVTNFDLSTYIRWLRPEALNTTPQEQQKNPELHNLMTNPSFTQTREIAEVPKFNRNPKEQDIPQYSTPLCYSNRANSSSSPTALGLLLQSSVFRELMQKNMNQGKIEEEQEEGSNRFAYLYSSHGNRIPNLQLPEEKALPPQHHRTGQSVWDECFQRI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01452 370 SMART rav1_2 160 224 IPR001471 GO:0003700|GO:0006355
Accr9g01452 370 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
Accr9g01452 370 SUPERFAMILY DNA-binding domain 159 220 IPR016177 GO:0003677
Accr9g01452 370 CDD AP2 67 126 IPR001471 GO:0003700|GO:0006355
Accr9g01452 370 Gene3D AP2/ERF domain 159 220 IPR036955 GO:0003700|GO:0006355
Accr9g01452 370 Gene3D AP2/ERF domain 60 126 IPR036955 GO:0003700|GO:0006355
Accr9g01452 370 SUPERFAMILY DNA-binding domain 66 126 IPR016177 GO:0003677
Accr9g01452 370 FunFam AP2-like ethylene-responsive transcription factor 159 220 - -
Accr9g01452 370 MobiDBLite consensus disorder prediction 43 69 - -
Accr9g01452 370 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 47 288 - -
Accr9g01452 370 PRINTS Ethylene responsive element binding protein signature 161 172 IPR001471 GO:0003700|GO:0006355
Accr9g01452 370 PRINTS Ethylene responsive element binding protein signature 200 220 IPR001471 GO:0003700|GO:0006355
Accr9g01452 370 CDD AP2 159 220 IPR001471 GO:0003700|GO:0006355
Accr9g01452 370 MobiDBLite consensus disorder prediction 44 65 - -
Accr9g01452 370 ProSiteProfiles AP2/ERF domain profile. 160 218 IPR001471 GO:0003700|GO:0006355
Accr9g01452 370 Pfam AP2 domain 159 210 IPR001471 GO:0003700|GO:0006355
Accr9g01452 370 ProSiteProfiles AP2/ERF domain profile. 51 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01452 Accr-Chr9 23338964 23341461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01452 42 222 AP2-EREBP Transcription Factor Family AT5G57390 62.032 7.96e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr9g01452 AP2 1.2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01452 - - gmx:100799621 429.483