Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01450 ATGGAGCTTGCAACTGTAAAAACTGAATTCTACCCAAGAAACCATAGGATGTTCATGATGGAAGGCGGCAATATTGAAATAAAGTGCATGAAAAGGAGGCGAAGAGACTCATCAGTGGCAGTTTTAGACAGCAAAGAGAAACAAGAGCACCCACAGCAGGGTGGTCAATCAACTACTACAACTACTGTCAAGAGAAGCTCAAGGTTTCGTGGAGTTAGCAGACATAGATGGACAGGGAGATATGAAGCTCATTTATGGGACAAAGGGACTTGGAATCCAACTCAAAAGAAGAAAGGGAAGCAAGGAGCTTATGCTGATGAAGAAGCTGCTGCTAGAGCATATGATTTGGCTGCACTCAAGTACTGGGGAAATTCTACCTTCACAAACTTTCCTGTATCTAATTATGAGAACGAGATTGAGATAATGAAAACTATGACAAAAGAAGAATATCTTGCTTCTTTAAGAAGAAGAAGCAGTGGCTTTTCCAGAGGAGTATCAAAGTACAGAGGAGTAGCAAGGCATCATCACAATGGAAGGTGGGAAGCAAGAATAGGGAGAGTGTTTGGTAACAAGTACCTCTACCTTGGCACTTACAGTACGCAAGAAGAGGCTGCTCGTGCATACGATATAGCAGCAATAGAATACAGAGGCTTGAACGCAGTAACAAACTTTGATTTGAGCACATATATTAGATGGCTAAGACCTGAAGCCCTTAATACTACTCCTCAAGAACAAAAACAGAACCCAGAATTTCACAGTCTCATGACGAACGCTAGCCTCAACCAAACCAGAGAAATCGCTGAGGTACCTAAGTTCAATCGCAATCCAAAGGAGCAAGACATACCTCAGTATTCAACCCCCTTATGTTATAGTAATAGTGCCAAGTCATCGTCTTCTCCGACAGCATTAGGGCTTCTGCTAAAATCGTCAGCGTTCAGACAGCTAATGCAGAAAAATATGAATCAGGGAAAAGGTGAAGAAGAACAAGAAGAAGAAAGTAATGGGTTTGCTTACTTGTACTCTTCCCATGGCAATAGAATACCAAATTTACAGTTGCCGGAGGAGAAAGCATTGCCAGCACAATATCATAGAACTGGGCAATCTGTATGGGACGCGGGTGCTTTCAACGAATGTGACCTTTCTTATTTGTTTTGA 1155 0.4199 MELATVKTEFYPRNHRMFMMEGGNIEIKCMKRRRRDSSVAVLDSKEKQEHPQQGGQSTTTTTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYADEEAAARAYDLAALKYWGNSTFTNFPVSNYENEIEIMKTMTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGLNAVTNFDLSTYIRWLRPEALNTTPQEQKQNPEFHSLMTNASLNQTREIAEVPKFNRNPKEQDIPQYSTPLCYSNSAKSSSSPTALGLLLKSSAFRQLMQKNMNQGKGEEEQEEESNGFAYLYSSHGNRIPNLQLPEEKALPAQYHRTGQSVWDAGAFNECDLSYLF 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01450 384 FunFam AP2-like ethylene-responsive transcription factor 166 227 - -
Accr9g01450 384 MobiDBLite consensus disorder prediction 38 69 - -
Accr9g01450 384 Pfam AP2 domain 166 217 IPR001471 GO:0003700|GO:0006355
Accr9g01450 384 Pfam AP2 domain 67 123 IPR001471 GO:0003700|GO:0006355
Accr9g01450 384 SUPERFAMILY DNA-binding domain 166 227 IPR016177 GO:0003677
Accr9g01450 384 ProSiteProfiles AP2/ERF domain profile. 167 225 IPR001471 GO:0003700|GO:0006355
Accr9g01450 384 MobiDBLite consensus disorder prediction 51 67 - -
Accr9g01450 384 CDD AP2 166 227 IPR001471 GO:0003700|GO:0006355
Accr9g01450 384 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 49 297 - -
Accr9g01450 384 SMART rav1_2 167 231 IPR001471 GO:0003700|GO:0006355
Accr9g01450 384 SMART rav1_2 68 137 IPR001471 GO:0003700|GO:0006355
Accr9g01450 384 SUPERFAMILY DNA-binding domain 67 133 IPR016177 GO:0003677
Accr9g01450 384 Gene3D AP2/ERF domain 67 133 IPR036955 GO:0003700|GO:0006355
Accr9g01450 384 Gene3D AP2/ERF domain 166 227 IPR036955 GO:0003700|GO:0006355
Accr9g01450 384 ProSiteProfiles AP2/ERF domain profile. 68 131 IPR001471 GO:0003700|GO:0006355
Accr9g01450 384 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Accr9g01450 384 PRINTS Ethylene responsive element binding protein signature 207 227 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01450 Accr-Chr9 23317803 23320270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01450 64 229 AP2-EREBP Transcription Factor Family AT5G57390 70.414 1.03e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr9g01450 AP2 9e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01450 - - gmx:100799621 440.269