Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01435 ATGACAACACTCTTGCTCCAAAACGAAAGATTTCCTCCCTCTTCTGATGTTCTCGACTCTATCTGGGCTCACAACTCAAATCCCACTTTCCCAGGATCAAAATCCATGGTGAATTTTGAGAGACTGAGTGGCTGCAGAGTAACAGACCGGCCATTTCTACATGGAATGGAGAAAGAAGAGACAGGAGAGGAAGATTACGAGGTATGCTTTCATCAAGCTGGGAAGAAGAGGAGGCTCACGAGCGAGCAAGTTCAGTTTCTGGAGAAGAACTTCGAGGTGGAGAACAAGCTAGAACCAGAGAGGAAGGTTCAGCTGGCGAAGGAGCTACGGTTGCAGCCAAGGCAAGTGGCTATATGGTTCCAGAACAGAAGGGCAAGGTTCAAGACCAAACAGCTTGAGCAAGACTACGGAAAATTGAAAGCTAGCTATGATAAACTCAAGAGTGATCATGACATTCTTGCCAAGGAGAACGACAAGTTAAAAGAAGAGGTGAAAGCCTTAAAAAACAGATTGAATGCTAGAGAAAAAGAGAAAGAGGATTCTCACAAATCAGAGGGCAATGCAGATCCTGGAGATTCAGAAGCAGTGAATTCGGCAGAGGGAGATCAACAGAAAGATGGAACCAAAAAGGAAGGAGCAGCGCCGAAGGGGATAACGGTATGGAAGCAGCAGGAAGAAGCGAATTCATCGGCGAAAAGCGACGTGTTGGATTCGGAGGACACGGAGGCGAACCACCATTCGTGGATGCAGCAGGAGCCGGCGGAAGCTGAAGCCGAAGCCGCGGAATACTCGGATTTCTCGCAGGACGAAGAAGACGAAAACCTTATGAGGAGCAATCTGCTGAATCTGGCGTGCTTCCCAAAGGTGGAAGAAGATGGATGCTACGACGATCCTCCGGAAGGTTGTTGTAACAATTTTGGATTCCCTGTTGAAGACCACACCTTCTGTTTTTGGCCTTACTGA 963 0.4777 MTTLLLQNERFPPSSDVLDSIWAHNSNPTFPGSKSMVNFERLSGCRVTDRPFLHGMEKEETGEEDYEVCFHQAGKKRRLTSEQVQFLEKNFEVENKLEPERKVQLAKELRLQPRQVAIWFQNRRARFKTKQLEQDYGKLKASYDKLKSDHDILAKENDKLKEEVKALKNRLNAREKEKEDSHKSEGNADPGDSEAVNSAEGDQQKDGTKKEGAAPKGITVWKQQEEANSSAKSDVLDSEDTEANHHSWMQQEPAEAEAEAAEYSDFSQDEEDENLMRSNLLNLACFPKVEEDGCYDDPPEGCCNNFGFPVEDHTFCFWPY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01435 320 Coils Coil 129 181 - -
Accr9g01435 320 MobiDBLite consensus disorder prediction 170 189 - -
Accr9g01435 320 SUPERFAMILY Homeodomain-like 64 132 IPR009057 -
Accr9g01435 320 ProSitePatterns 'Homeobox' domain signature. 105 128 IPR017970 GO:0000981|GO:0006355
Accr9g01435 320 CDD homeodomain 75 131 IPR001356 GO:0003677
Accr9g01435 320 FunFam homeobox-leucine zipper protein ATHB-6-like 78 124 - -
Accr9g01435 320 Gene3D - 70 136 - -
Accr9g01435 320 ProSiteProfiles 'Homeobox' domain profile. 70 130 IPR001356 GO:0003677
Accr9g01435 320 MobiDBLite consensus disorder prediction 232 246 - -
Accr9g01435 320 Pfam Homeobox associated leucine zipper 130 171 IPR003106 GO:0006355|GO:0043565
Accr9g01435 320 Pfam Homeodomain 75 128 IPR001356 GO:0003677
Accr9g01435 320 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 61 240 IPR045224 GO:0003700
Accr9g01435 320 MobiDBLite consensus disorder prediction 170 272 - -
Accr9g01435 320 SMART HOX_1 73 134 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01435 Accr-Chr9 22790722 22792418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01435 11 175 Homeobox Transcription Factor Family AT3G01470 49.405 1.62e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr9g01435 Homeodomain 2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01435 K09338 - qsa:O6P43_025407 316.235