Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01434 ATGGCGGCAGGTGGAAAACTCTTTGGGGCATCCGATATGACAACACTCTTGCTCCAAAACGAAAGATTTCCTCCCTCTTCTGATGTTCTCGACTCTATCTGGGCTCACAACTCAAATCCCACTTTCCCAGGATCAAAATCCATGGTGAATTTTGAGAGACTGAGTGGCTGCAGAGTAACAGACCGGCCATTTCTACATGGAATGGAGAAAGAAGAGACAGGAGAGGAAGATTACGAGGTATGCTTTCATCAAGCTGGGAAGAAGAGGAGGCTCACGAGCGAGCAAGTTCAGTTTCTGGAGAAGAACTTCGAGGTGGAGAACAAGCTAGAACCAGAGAGGAAGGTTCAGCTGGCGAAGGAGCTACGGTTGCAGCCAAGGCAAGTGGCTATATGGTTCCAGAACAGAAGGGCAAGGTTCAAGACCAAACAGCTTGAGCAAGACTACGGAAAATTGAAAGCTAGCTATGATAAACTCAAGAGTGATCATGACATTCTTGCCAAGGAGAACGACAAGTTAAAAGAAGAGGTGAAAGCCTTAAAAAACAGATTGAATGCTAGAGAAAAAGAGAAAGAGGATTCTCACAAATCAGAGGGCAATGCAGATCCTGGAGATTCAGAAGCAGTGAATTCGGCAGAGGGAGATCAACAGAAAGATGGAACCAAAAAGGAAGGAGCAGCGCCGAAGGGGATAACGGTATGGAAGCAGCAGGAAGAAGCGAATTCATCGGCGAAAAGCGACGTGTTGGATTCGGAGGACACGGAGGCGAACCACCATTCGTGGATGCAGCAGGAGCCGGCGGAAGCTGAAGCCGAAGCCGCGGAATACTCGGATTTCTCGCAGGACGAAGAAGACGAAAACCTTATGAGGAGCAATCTGCTGAATCTGGCGTGCTTCCCAAAGGTGGAAGAAGATGGATGCTACGACGATCCTCCGGAAGGTTGTTGTAACAATTTTGGATTCCCTGTTGAAGACCACACCTTCTGTTTTTGGCCTTACTGA 999 0.4805 MAAGGKLFGASDMTTLLLQNERFPPSSDVLDSIWAHNSNPTFPGSKSMVNFERLSGCRVTDRPFLHGMEKEETGEEDYEVCFHQAGKKRRLTSEQVQFLEKNFEVENKLEPERKVQLAKELRLQPRQVAIWFQNRRARFKTKQLEQDYGKLKASYDKLKSDHDILAKENDKLKEEVKALKNRLNAREKEKEDSHKSEGNADPGDSEAVNSAEGDQQKDGTKKEGAAPKGITVWKQQEEANSSAKSDVLDSEDTEANHHSWMQQEPAEAEAEAAEYSDFSQDEEDENLMRSNLLNLACFPKVEEDGCYDDPPEGCCNNFGFPVEDHTFCFWPY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01434 332 Coils Coil 141 193 - -
Accr9g01434 332 MobiDBLite consensus disorder prediction 182 201 - -
Accr9g01434 332 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 71 252 IPR045224 GO:0003700
Accr9g01434 332 SUPERFAMILY Homeodomain-like 76 144 IPR009057 -
Accr9g01434 332 ProSitePatterns 'Homeobox' domain signature. 117 140 IPR017970 GO:0000981|GO:0006355
Accr9g01434 332 Pfam Homeodomain 87 140 IPR001356 GO:0003677
Accr9g01434 332 Gene3D - 82 148 - -
Accr9g01434 332 CDD homeodomain 87 143 IPR001356 GO:0003677
Accr9g01434 332 ProSiteProfiles 'Homeobox' domain profile. 82 142 IPR001356 GO:0003677
Accr9g01434 332 MobiDBLite consensus disorder prediction 244 258 - -
Accr9g01434 332 FunFam homeobox-leucine zipper protein ATHB-6-like 90 136 - -
Accr9g01434 332 MobiDBLite consensus disorder prediction 182 284 - -
Accr9g01434 332 SMART HOX_1 85 146 IPR001356 GO:0003677
Accr9g01434 332 Pfam Homeobox associated leucine zipper 142 183 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01434 Accr-Chr9 22790722 22792454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01434 23 187 Homeobox Transcription Factor Family AT3G01470 49.405 1.68e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr9g01434 Homeodomain 2.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01434 K09338 - qsa:O6P43_025407 323.553