Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01404 ATGGATCCAGGAGCTATGATGAACGAGGGTTCGTTTGCGAATGGGGGAGCTAATACGGGGCCTTATAACCTGTCGGATATCTGGCAATTTCCGATGAATGTCGGTGTGGGCCTTGGGGATTCCGGCAGTGGGTTGGGGCTGAGGAGGCCACAGTTTGGGCATAATTTGGGGCCGCCGCCGTTCGGTGATTATACAAATCGGGATGTACCCGGTAATGATCAAATCAACTCAGAGCAGGGAGGGAATAACAACAATACTAATAATCATGGAGTCAACAATAATAGGAAGCGTCGTGATTCAGAGGATGAGTTCACCAAGGGCGTCTCCACCAGTAATGGCGTGAATGATGGTGATGAAGGAAAACGGCTTAAAGCTTCAGCGAATAGGACTGAGAGTAGGGACAATAAAGCTGAAGCGGAGCCCAGTTCAGGAAAGCCGTCGGAGCAAAATAACCAGCCACCTCCTCCTGAGCCTCCTAAGCAAGATTACATTCATGTTCGAGCAAGAAGAGGTCAAGCTACTGATAGCCATAGTCTAGCAGAAAGAGCTAGAAGGGAGAAGATAAGTGAGAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAATAAGGTTATTGGGAAAGCACTGGTCCTTGATGAGATTATAAATTATATCCAATCACTACAGCGCCAAGTTGAGTTCCTGTCTATGAAACTTGAAGCCGTAAATACAAGATTGAACCCCAGCATCGAAGTCTTTCCTCCAAAAGATTTTGGTCAACAATCATTTGAAACAGATGGCCTGGCATTTGGCTCACAAGCTACAAGAGAGTATAGCCGTGGTTCGTCACCGGAGTGGTTACACATGCAGGTTGGTGGTGGGTTTGAAAGAACGTCTTAG 882 0.4683 MDPGAMMNEGSFANGGANTGPYNLSDIWQFPMNVGVGLGDSGSGLGLRRPQFGHNLGPPPFGDYTNRDVPGNDQINSEQGGNNNNTNNHGVNNNRKRRDSEDEFTKGVSTSNGVNDGDEGKRLKASANRTESRDNKAEAEPSSGKPSEQNNQPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRLNPSIEVFPPKDFGQQSFETDGLAFGSQATREYSRGSSPEWLHMQVGGGFERTS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01404 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 240 IPR036638 GO:0046983
Accr9g01404 293 SMART finulus 178 228 IPR011598 GO:0046983
Accr9g01404 293 Pfam Helix-loop-helix DNA-binding domain 176 223 IPR011598 GO:0046983
Accr9g01404 293 CDD bHLH_AtBPE_like 162 247 - -
Accr9g01404 293 Gene3D - 169 245 IPR036638 GO:0046983
Accr9g01404 293 MobiDBLite consensus disorder prediction 117 141 - -
Accr9g01404 293 FunFam Basic helix-loop-helix transcription factor 169 241 - -
Accr9g01404 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 222 IPR011598 GO:0046983
Accr9g01404 293 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 263 IPR024097 GO:0006355
Accr9g01404 293 Coils Coil 219 239 - -
Accr9g01404 293 MobiDBLite consensus disorder prediction 49 162 - -
Accr9g01404 293 MobiDBLite consensus disorder prediction 69 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01404 Accr-Chr9 20994911 20997412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01404 1 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 56.972 9.80e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr9g01404 HLH 2.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01404 - - qsa:O6P43_025379 406.371