Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01390 ATGTCCACGGACGGCCACGTCATTTCGTCGACTCCGGGAGCCTTCAGGCTCCGTTGGGACGTCTTCCTGAGCTTCAGAGGCGCCGATACTCGTAACTGCTTCACGATACCCCTTTACAACGCCCTCCAATCTCGCGGTGTTCGGGTTTTCCTCGACGACGTTGGACTGAATCGCGGTGACCACATAGCCCCGAGTCTGATCGAAGCCATCCGTGACTCTGCCGTTTCGATTATCGTCATCTCTCCTGATTACGCCTCTTCTCATTGGTGTCTGGAGGAGCTAGCCGAGATTTGCGACTGCCGTAGACTGATTCTGCCGGTGTTCTTCAACGTCAACCCGCGTGATGTCCGGAAACAAGGGGGTCCATTCAAAGATTCTTTCGAGGATCACAGGGCTAAGAGGAGAGAAGAAGATGTACTGAGGTGGAGGGAAGCTATGAAGAAAGTAGGTGGAATCGCTGGTTTCCCTTTCTCGCATCCCAGTGAAAAGGAAGAAGGCTCTGCAGAAAAGAGAGATGACCTGATTCGACTTTTAGTAACAAGGATTCTGAGAGAACTGAGTAATGCTCCGGTGGGTGTGGCTGAATTTATTACCGTTGGACTCGATCGTCGTATTGAACGATTGATGGAACTGTTAGACATGAGATCCAACGGCATAAGAGTATTGGGATTGTATGGGATGGGCGGGATTGGCAAGACCACCCTTGCGAAGGCACTTTTTAACAGACTCGTTGTGGATTTTGAGCGACGCAGCTTCATTTCAAGTGTTAGAGAAGTTTCATCCAAAGATGGAGGCCTAATTTCTCTAAGAAACAGAATTATTGGTGACATATCCTCTCAACCAGTGGTTGGTAACGATATTTCTACTTTCATAAAAACAGTCAGTGAAAACCGTGCTCTGATAATTCTGGATGATGTGGATGATGTGAAGCAGCTCGATACTCTAATTGGCAAAAGAGAATGGTTCCATGAGGGAAGCCGTGTTGTAGTAACGTCGAGGGATACACAAGCTTTGGCTGAGACTTATGTTAATGTCTTCTACGAGGTTCTGATATTGGATGACTCTGAGTCACTAGAATTATTCTGTTACCATGCAATGAGAAGAAAGGAACCTGCAGACAACAATTTTTTGAAATTGTCAAAGGAAATAGTGTCTCTAACCGGAAGATTGCCTTTAGCTCTGCAAGTGTTTGGTTCAATGTTGTTTGGTAAGAGAAGGGAAAAGGAATGGGTTGATGCTTTGGAGAAGCTGAAACTGATTCGACCTGGGGATCTCCAGGAAGTGTTGAAGATAAGTTATGAAGGGTTAGATGAACAAGAGAAGTACATCTTCCTTGATATTGCTTGCTTGCTTGTTCAAATGAGCATGAAGCGAGAAGATGTCATTGATGCATTGAGAGGTTGTGGATTTAAGGGAGAGATAGCAATCACGGTTCTTACTGAGAAATGTTTGATCAAAATCAGAGAGGATGAAACCATTTGGATGCACGATCAGATTAGAGACATGGGAAGGCAAATTGTTGTGGATGAAAATCTGGTTGATCCTGGTATGCGTAGTAGATTGTGGGATCGATCTGAAATTCTAACTGTTTTGAGGAATTTGAAGGGAACTCGGAGAATTCAAGGGATGATCCTAGACTTCGAGACAAGATCTGCCAAAGATCATAGAGGTGAGGAAGCAATTTCTTGGAACAACCTTCAACGGGGTACAAGTGTCACAAATGCCCTGGCATTTCCTAAACAGATGCACAAGAAATATTTTCAACGAGTTGAGAAAGATAGAGAGGCTCTAGTGATTCACACCAAGTCATTTGAATCAATGGTGAGCTTGGTGCTGCTTCATATCAATAATTTGAGATTGGAAGGGAAGTTCAAATCTTTTCCTGCAGAATTGAAGTGGCTACAATGGCATGGATGCCCTTTAAAATGCATGCCTTCTGATTTTTTCCCTCAAGAATTGGCTGTCCTTGACCTCTCACACAGCAATCTTGAGAACTTGTGGGATAGGAAAGGCCACAAGACTCGTTGTGGATTTTGA 2037 0.4453 MSTDGHVISSTPGAFRLRWDVFLSFRGADTRNCFTIPLYNALQSRGVRVFLDDVGLNRGDHIAPSLIEAIRDSAVSIIVISPDYASSHWCLEELAEICDCRRLILPVFFNVNPRDVRKQGGPFKDSFEDHRAKRREEDVLRWREAMKKVGGIAGFPFSHPSEKEEGSAEKRDDLIRLLVTRILRELSNAPVGVAEFITVGLDRRIERLMELLDMRSNGIRVLGLYGMGGIGKTTLAKALFNRLVVDFERRSFISSVREVSSKDGGLISLRNRIIGDISSQPVVGNDISTFIKTVSENRALIILDDVDDVKQLDTLIGKREWFHEGSRVVVTSRDTQALAETYVNVFYEVLILDDSESLELFCYHAMRRKEPADNNFLKLSKEIVSLTGRLPLALQVFGSMLFGKRREKEWVDALEKLKLIRPGDLQEVLKISYEGLDEQEKYIFLDIACLLVQMSMKREDVIDALRGCGFKGEIAITVLTEKCLIKIREDETIWMHDQIRDMGRQIVVDENLVDPGMRSRLWDRSEILTVLRNLKGTRRIQGMILDFETRSAKDHRGEEAISWNNLQRGTSVTNALAFPKQMHKKYFQRVEKDREALVIHTKSFESMVSLVLLHINNLRLEGKFKSFPAELKWLQWHGCPLKCMPSDFFPQELAVLDLSHSNLENLWDRKGHKTRCGF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01390 678 SUPERFAMILY "Winged helix" DNA-binding domain 424 531 IPR036390 -
Accr9g01390 678 ProSiteProfiles TIR domain profile. 17 190 IPR000157 GO:0007165
Accr9g01390 678 PRINTS Disease resistance protein signature 221 236 - -
Accr9g01390 678 PRINTS Disease resistance protein signature 293 307 - -
Accr9g01390 678 PRINTS Disease resistance protein signature 387 401 - -
Accr9g01390 678 PRINTS Disease resistance protein signature 648 664 - -
Accr9g01390 678 Gene3D - 15 185 IPR035897 -
Accr9g01390 678 Pfam NB-ARC domain 204 420 IPR002182 GO:0043531
Accr9g01390 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 447 IPR027417 -
Accr9g01390 678 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 155 IPR035897 -
Accr9g01390 678 Gene3D - 186 345 IPR027417 -
Accr9g01390 678 SMART till_3 18 152 IPR000157 GO:0007165
Accr9g01390 678 Gene3D Ribonuclease Inhibitor 546 673 IPR032675 -
Accr9g01390 678 SUPERFAMILY L domain-like 598 668 - -
Accr9g01390 678 Gene3D - 351 437 IPR042197 -
Accr9g01390 678 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 666 IPR044974 GO:0006952
Accr9g01390 678 Pfam TIR domain 19 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01390 Accr-Chr9 20012303 20020778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01390 199 667 WRKY Transcription Factor Family AT5G45050 29.424 3.15e-54 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01390 - - lang:109340539 790.801