Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01387 ATGTCACCAGACGGCGATGTCGATTCGTCAGCTCCGAGACCCTCCAGGCGCCGGTGGGACGTGATCCTGAGCTTCCGAAGTACGGATAATTGTGGTTGCTTCACCGAACCCCTCGTCAACGCCCTCCAATCTGGCGGTCTTCGGATTTTTCTAGACGACGTTGGATTAGATCGTGGTGACCAGATAGCCCAACAGAGTCAGCTCGAAGCTATTGATGACTCGGCCGCTTCGATCATCATCGTCTCTCCTAATTACGCTTCTTCTCAATGGTGTCTGGAGAAGCTCGCTAAGATTTGCGACTGCAAGAGACTAATTCTGCCGGTGTTCTTCAACGTCGTCCCGAGTGATGTCCGGAATCAAGGGGGTCCATTCAAAGATTCTTTCGAGGATCACAAGGCCAAGAGGAGAGAAGAAGACGTACTAAGGTGGAGGGAAGCTATGAAGAAAGTAGGTGGAATCGCTGGTTTCGTTTTTCCGAATCCCAGAGAAAGGGAAGATGACCAAATTCGAGGTTTAGTCGAAAGAATTCTAAGAGAACTGAGCAATACTCCGGTGCGTGTGGCTGAATTTACCGTTGGACTCGATGCTCGTATTGAAAACCTACTGGCATTGTTAGACATAAACTCCAATGGTGTAAGAGTATTGGGATTATTTGGCATGGGTGGGGTTGGGAAGACAACCCTTGCAAAGGCTCTTTTTAACAGACTCGTTGTGCATTTTGAGCATCGCAGCTTCATTTCAAGTGTAAGAGAAGAATCATCCAAAGATGGGGGTTTAATTGCTCAAAGAAACAGAATTATCAACGACATTTACCCTCAAGTAGTTGATGGTGATGATATTCCTGCTTTCAGAAGAACAGTTGGTGAATACCGAGTTCTGATAATCCTGGATGATGTGGATGATGTGAAGCAACTTGATACTCTAATAAGAAAAAGAGAATGGTTCCATGAGGGAAGCCGCATTATAGTCACCTCAAGGGATACACGAGCTTTGCCTGAGACTCATGTTAATGTCTTCTACGAGGTTAAGGTATTGGTTGACTCTGATTCATTAGAACTATTCTGTTACCATGCAATGAGAAGAAATGAACCTGCAGGCGAAGATCTTTTGGAGTTGTCAAAGGAAATAGTGTCTGTAACGGGAGGGTTGCCTTTGGCTCTAGAGGTGTTTGGTTCAATGCTGTTTGGTAAGAGAAAGAAAGAGGAATGGGTTGATGTTGTGACGAAGCTGAAGCAGGCTGGAACTGGGAACGTACATAAAGTGTTGAGGATCAGCTATGATGAGGGGTTAAATGAACAAGAGAAATGCATCTTCCTTGACATTGCTTGTCTGTTCGTTCAGATGAGGATGAAGCAAGAAGATGTTATTGATGTACTGAGAGGTTGTGAATTTGATGGAGAGGAAGCAATTAAAGTTCTCTCAAAAAAATGTCTGATCAAAATCAGAGAGGATGAGACCATTTGGATGCATGATCAAATTAGGGATATGGGAAGGCAAATTGTTGTAGATGAAAACTTTGTTGATTACGGTATGCGTAGTAGATTGTGGGATCGATCTAAAATTCTTGGTGTTTTGAGGAATTTGAAGGGAACAAGCAGAATTCATGGGATTGTGCTAGACTTAGAGAAAGGAGATGCTAATGAAGCAATTTCTGGGAAAAACCTTCAATGTGGTTCAAGTTTAGCAAATGTGGTGGCATTCCTCAAACAGATGCACAAGAAATATTTTCAACGAGTTGAGAGAGACATAGAGGCTGGAATGATTCATACCAAGGCCTTTAGATCAATGGTGAACTTGATGCTGCTTCAGATTAATGATTTGAGATTGGAAGGCAAGTTTAAATATTTCCCTTCAAAATTGAAGTGGCTAAAATGGCAACGGTGCCCATTAACATGCTTGCCTTCTGATTTTTGGCCCCATGAATTGGCTATCCTTGACCTCGCACACAGCAATATTGAGAGTTTGTGGAATCGAAAAGGCTGCAAGGCGCCAGAGAACATAATAGTTATGAACCTCTCTGAGTGCTATCGCTTGAAGGCCCTTCCGGATTTGTTTGGGTGCCGACATTTAGAGAAGATTGTTTTAGTGGGCTGCATTAAACTAAGTAGGATTCACGAATCAGTTGGCAATCTGACCACACTTCGTCATTTCAATCTGACTCGTTGTGAAGAACTTACTGAGTTACCCAATGATATATCGGGGTTGGAAAATCTAGAGAGCCTCTGTCTCTCTGACTGCTACAAGTTGAAATCGTTACCAAGAAACATGGCCAACTTGAAATCACTGAGAAAACTAGTTGCTGATGGCACGGCCATAGCAGAGCTGCCTGAGACTATTTTTTGCCTTGAAAAACTTGAAGTTCTTGTTTTAAAGGGTTGCTGCAACTTAAAAAGACTACCTGACAACATAACTCATTTGTGTTCTCTGCAAGAGCTGTCTCTCGACGGATCTGGATTAGAAGGACTCCCCAACTCTGTAGGGCATTTGAAAAACCTTGAGAAGCTTGGTTTGATGCATTGCAAATCTCTTAATGAGATTCCTGATTCTATTGGAGATCTTTTTTCACTTCCAAAGCTTCAGCTTAACGGTACTGCTATAAAAGAGCTTCCTTCTTCAATTGGATCATTGTCTTGTCTAAATGAACTCTCTGTAGGAGGCTGTAAGTCTCTGAGAAACTTGCCTGAATCTATTAAGCTTTTGGCTTCTGTTGCTGTGCTTCAGCTAGATGGGACAGCGATCACAGATTTGCCAGATGAGATTGGGGATATGAGATTACTCAAAAAGCTTGAAATGAAGAATTGCCAGATGAGATATCTGCCTGAATCGATTGGCAACCTCACAGCTCTTACAACCTGGAACATTTACAGAGGTAACATTGTAGAACTGCCAGAATCTATTGGAAAGCTCGAGAATTTAGTCTATTTAAACTTGGAACAATGCACAATGCTTAGAAGGCTTCCGCATTCTATAGGACATTTGAAGTCCTTATATCACCTTAGAATGGAGGAAACGGGTCTGACAGAATTACCTCAAAGTTTTGGCATGCTTACCAACTTAAGGACGCTGAAAATGGCCAAGAAGTCAGAAAGTAATATGCTGCAGGATTCTTTTGTAATCTCATCTTTTTTCTGCAATATGAGATTTCTGAATGATCTGGATGCTCGTGGTTGGAGAATAGCTGGGAAAATTACTGATGATTTTGAGAAGTTGTCCTGTTTACAGACTTTGAACCTAAGCCAAAACAAATTTCACAGCTTTCCTTCCAGTGTGGTAGGGCTTTCCGTTCTCAAGGTACTTCATGTTCAAAACTGCCTCAAGCTGGTTTCTCTACCTGCTCTTCCCTCGAGCTTGACGAATTTGAATGCTGCAGACTGTTGTAACTTACAAAGCATTCATGACCTTTCAAGTTTAACAAACTTGCAGGAACTAAACTTCACCAATTGTGTAAAATTGGTGGATATTCCTGGTCTTGAACGGTTAGGGTCTTTGAGGAAATTGTTCTTTGGTCGATGCATTACATGCTCCTCCACAATCCGTAAGAGATTCTCTAAGGTTACACTGAGGAATTTAATGAATTTGAGCATGCCGGCAACAAGATTACCCAAATGGTTTTCAGGACAAGCTGTAACCTTTTCAAAGCCCAATAGCCGTGAACTAACAGGTGTTATTATAGGTATCATTCTTTCAATCCACCGTGATATAGCTAGTGAACTACAAGTTCAACTTCCCGGAGTAATTGATATCAAAGTAAATATCCTCAGACGTGGAGAAAATCCATATAGTTCAGTATTGGACTTGCGTTGGTTGCCAAGAACGAATGAAGAACACATACACATTTGCAGGTATCGGTATAACTCAAAACTCATCTCTATGTTGCAAGACGGTGACACAATTTGTGTGAAACAGAGAGATCCACCTGTGGATAGGGGGTTAGAGCTGAAAAAATGTGGGGTTCATTTGATCTTTGATGGGGATGATGATTATTATGGTGGAGATGAAGAATCTGTGGACCGAAATTTACCATCTCTGTCAGAAAAATTGGCCAAGTTTTTCAACACTGGCGAACAAGATAGCTCCACAGATGGAATTGAGAGGTGA 4098 0.4197 MSPDGDVDSSAPRPSRRRWDVILSFRSTDNCGCFTEPLVNALQSGGLRIFLDDVGLDRGDQIAQQSQLEAIDDSAASIIIVSPNYASSQWCLEKLAKICDCKRLILPVFFNVVPSDVRNQGGPFKDSFEDHKAKRREEDVLRWREAMKKVGGIAGFVFPNPREREDDQIRGLVERILRELSNTPVRVAEFTVGLDARIENLLALLDINSNGVRVLGLFGMGGVGKTTLAKALFNRLVVHFEHRSFISSVREESSKDGGLIAQRNRIINDIYPQVVDGDDIPAFRRTVGEYRVLIILDDVDDVKQLDTLIRKREWFHEGSRIIVTSRDTRALPETHVNVFYEVKVLVDSDSLELFCYHAMRRNEPAGEDLLELSKEIVSVTGGLPLALEVFGSMLFGKRKKEEWVDVVTKLKQAGTGNVHKVLRISYDEGLNEQEKCIFLDIACLFVQMRMKQEDVIDVLRGCEFDGEEAIKVLSKKCLIKIREDETIWMHDQIRDMGRQIVVDENFVDYGMRSRLWDRSKILGVLRNLKGTSRIHGIVLDLEKGDANEAISGKNLQCGSSLANVVAFLKQMHKKYFQRVERDIEAGMIHTKAFRSMVNLMLLQINDLRLEGKFKYFPSKLKWLKWQRCPLTCLPSDFWPHELAILDLAHSNIESLWNRKGCKAPENIIVMNLSECYRLKALPDLFGCRHLEKIVLVGCIKLSRIHESVGNLTTLRHFNLTRCEELTELPNDISGLENLESLCLSDCYKLKSLPRNMANLKSLRKLVADGTAIAELPETIFCLEKLEVLVLKGCCNLKRLPDNITHLCSLQELSLDGSGLEGLPNSVGHLKNLEKLGLMHCKSLNEIPDSIGDLFSLPKLQLNGTAIKELPSSIGSLSCLNELSVGGCKSLRNLPESIKLLASVAVLQLDGTAITDLPDEIGDMRLLKKLEMKNCQMRYLPESIGNLTALTTWNIYRGNIVELPESIGKLENLVYLNLEQCTMLRRLPHSIGHLKSLYHLRMEETGLTELPQSFGMLTNLRTLKMAKKSESNMLQDSFVISSFFCNMRFLNDLDARGWRIAGKITDDFEKLSCLQTLNLSQNKFHSFPSSVVGLSVLKVLHVQNCLKLVSLPALPSSLTNLNAADCCNLQSIHDLSSLTNLQELNFTNCVKLVDIPGLERLGSLRKLFFGRCITCSSTIRKRFSKVTLRNLMNLSMPATRLPKWFSGQAVTFSKPNSRELTGVIIGIILSIHRDIASELQVQLPGVIDIKVNILRRGENPYSSVLDLRWLPRTNEEHIHICRYRYNSKLISMLQDGDTICVKQRDPPVDRGLELKKCGVHLIFDGDDDYYGGDEESVDRNLPSLSEKLAKFFNTGEQDSSTDGIER 1365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01387 1365 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 154 IPR035897 -
Accr9g01387 1365 Pfam TIR domain 20 160 IPR000157 GO:0007165
Accr9g01387 1365 SMART till_3 18 153 IPR000157 GO:0007165
Accr9g01387 1365 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 878 IPR044974 GO:0006952
Accr9g01387 1365 SMART LRR_typ_2 759 782 IPR003591 -
Accr9g01387 1365 SMART LRR_typ_2 900 923 IPR003591 -
Accr9g01387 1365 SMART LRR_typ_2 993 1015 IPR003591 -
Accr9g01387 1365 SMART LRR_typ_2 806 829 IPR003591 -
Accr9g01387 1365 SMART LRR_typ_2 853 876 IPR003591 -
Accr9g01387 1365 SMART LRR_typ_2 1070 1093 IPR003591 -
Accr9g01387 1365 Gene3D Ribonuclease Inhibitor 580 793 IPR032675 -
Accr9g01387 1365 Gene3D Ribonuclease Inhibitor 1033 1207 IPR032675 -
Accr9g01387 1365 Gene3D Ribonuclease Inhibitor 794 1032 IPR032675 -
Accr9g01387 1365 PRINTS Disease resistance protein signature 380 394 - -
Accr9g01387 1365 PRINTS Disease resistance protein signature 827 843 - -
Accr9g01387 1365 PRINTS Disease resistance protein signature 214 229 - -
Accr9g01387 1365 PRINTS Disease resistance protein signature 286 300 - -
Accr9g01387 1365 Gene3D - 18 178 IPR035897 -
Accr9g01387 1365 SUPERFAMILY L domain-like 890 1193 - -
Accr9g01387 1365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 441 IPR027417 -
Accr9g01387 1365 ProSiteProfiles TIR domain profile. 17 184 IPR000157 GO:0007165
Accr9g01387 1365 Pfam NB-ARC domain 198 426 IPR002182 GO:0043531
Accr9g01387 1365 SUPERFAMILY L domain-like 488 917 - -
Accr9g01387 1365 Gene3D - 179 338 IPR027417 -
Accr9g01387 1365 Gene3D - 345 429 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01387 Accr-Chr9 19803836 19809893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01387 12 882 WRKY Transcription Factor Family AT4G12020 29.111 9.46e-75 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01387 - - lang:109340539 1482.23