LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr9g01381	ATGGCTTCTTCTTCCTTCTTCTCCAATGTGACGCCATGGCTTTGTTTAACCTTTCTCTTCGTTCTTCAAACTTCTCTGCTCTTACCAATCTGTAACTGTCAGCCTCAGAACATCGAAACTGTTTTTCCACCTGAAACTCCACCCCCAGCTCCAGCTCCTCCACCGACACCGAGCACTTCTCCATCGCCGCCGGTTGTCCCGCCGCCGGAAACAACTAGAAGTCCTTCTTCTTCATCATCATCATCGAACAGTAAGGTAGGAAGGGCTGTGGCTATTACTGCAGCAAGCACAGTGGTTGTTTCTGCGTTAGCCTTCTTCTTTATCCGATGGTGTTTAAAGAAAAGACGCAGCGAAGAGATACGTGTGAGCTCTGCTTCGGAACCTGTTGTTTTGCCGCCGGCTAACGCGTTTGAGCGAATTGAAGGGAATGTGAGGGGATTGATTGTTGATGAGAATGGTTTGGATGTGATTTATTGGAGGAAGCTTGAAGGGCAGAATGGCTCCAAGAAGAAGGGATTACAGAGAGAAGAGGTTCGAACTATTGCTAAAGAACAAGATCAAGAACAAGAAGTAAAGGTAGTAACAGAAGAAGAAGAAGAAGTTGATGGTGATGGTGGGTTTGGAGGAAATCATCGCCGGAAAAAATCTGAGCCTGTTCAAGAAATTCCTCTGCTTCGTGGGAAATCTTCGGCTTCCGAGAAGAGTTTAATGTCAGAAGACGAACATGGGTCGAGTCGGAGTTGGATGAGAACGTTGTCTCGAAAAACAGCCCCTCCTCCTCCCAATCCTCCGGCGACGACAGCGGCGGCGGCTGTTTCGCCACCATTACCACTGCCACCCGCCGCGTATTATTATTCTTCTGTTTCAAAAGCGAAAAACGTGGAACCACCACCACAACCACCACATGCTGCTGCTTCTTCTTCTGTTGTTTCACCACCATTACCACCACTACCCGCCGCTTATTATTATTCTTCTGTTTCGAAAGCGAAAAACGTGGAACCACCACCACATGCTGCTGCTTCTTCTTCTGTTGTTTCTCCATCCTTACCACCACCACCCTCTGCTTACTTTTCTGCTGTTAGCAAATCAAAAAGCACTGAACCACCACCTCCACCACCATTAATTCCAGATAAAAAGGCTCCGCCTCCCCCACCTCCGCCGGCTAAAAAGGGTCCAGCGCCGCCACCCCCGCCTCCGCCAGCTAAAAATGGTCCAGCACCACCACCTGCTCCGCCCATGGCCGGAAACTTGAAGTCATCTTCAAAACCACCACCTAGCCCAGCTGAAATGTCAGAGGAAGACACTGATAAAGTGAAACTTAAGCCTTTACATTGGGATAAAGTAACCACTAATGTTGATCATTCCATGGTTTGGGACAAGTTGGACCGTGGCTCCTTCAGGGTTGATCAGGATTTTTTGGAAGCTCTTTTTGGATCTGTGGCTACAAGCAAAAGAAGCTCAAGAGTGGAAAACGTTTCTTCTAGTCCAAGCAAGGAGGCTTCTGCACAATCAAGCACGATTTTCATTCTTGACCCCAAAAAATCACATAACTTTGCTATTGTTTTGAAATCTCTAGCCGTGTCACGGCGAGAAATCGTCGATGCCCTTGAAGAGGGTCAAGGCCTTAGTTCAGATATAATTGAGAAGATTGTTAGATTAGCTCCAAATCAAGAAGAGCAATCTAATATCCTTCAATATAATGGAGACCCTGCAAGGCTTGCAGTTGCAGAATCCTTCCTTTATGACATACTCAATGCTGTTCCTTCGGCTTTCAAGCGTTTGAATGCTATGCATTTCAGGTTCAACTATGATTCTGAGGTATTAGAGATCAAGGAATCTTTGAACACCCTTGAATTGGCTTGTAAGGAGCTTCGGAAACGAGGGCTGTTTGTGAAGCTTCTCGAGGCGGTCCTTAAAGCTGGGAACCATATGAATGCCGGCACATCAAGAGGCAATGCTGAAGCTTTCAACTTGTCTTCTTTGAGGAAGCTCAAAGATGTCAAAACCACAGATGGGAAATCCACATTGCTTCATTTTGTGGTCGAAGGGGTAGTCCGGTCTGAGGGGAGACGGTGCGTTCTTAACCGTGATTGGAGCCTAAGTCGCAACGGAAGCAGGAAGATGAACGGCAAAGGAGAGTCTGAGAACTTTGTTTCAGATGAGCAGAGAGAAATGGAATACTTAAGGTTAGGATTACCATTTGTTGGAGGAATTAGTACTGAGTTCTCCAATTTGAAGAAAGCAGCCATTATAGATTACAGTAGTTTACTTGCTTCAATCTCATCACTCTCCACTAAGATAGCAGAAATGAAACAGCTTGTTTCACAGTGTGGGAATGCGAAAGGTGGGAACTTTGAGAGAGAAATGGACTTATTTCTGAGAAATGCTGAGGAAGAATTGGGATTAGTGAGAGATGAGGAGAAAAGGGTAATGCAGATTGTGAAGAAAACAAATGAGTACTATCAAGGAGGAGCTTCAAAGAATAAAGCAGAGAGCGTTGTGGAAATATTTGTTATTGTCAAGGATTTCCTGGTGATGGTTGATCAGGCCTGTATTGACATTTCTCGTAATATGAACCAGAAGAGGAAGACAACAAAATCAAATTCTGGGTAA	2613	0.4546	MASSSFFSNVTPWLCLTFLFVLQTSLLLPICNCQPQNIETVFPPETPPPAPAPPPTPSTSPSPPVVPPPETTRSPSSSSSSSNSKVGRAVAITAASTVVVSALAFFFIRWCLKKRRSEEIRVSSASEPVVLPPANAFERIEGNVRGLIVDENGLDVIYWRKLEGQNGSKKKGLQREEVRTIAKEQDQEQEVKVVTEEEEEVDGDGGFGGNHRRKKSEPVQEIPLLRGKSSASEKSLMSEDEHGSSRSWMRTLSRKTAPPPPNPPATTAAAAVSPPLPLPPAAYYYSSVSKAKNVEPPPQPPHAAASSSVVSPPLPPLPAAYYYSSVSKAKNVEPPPHAAASSSVVSPSLPPPPSAYFSAVSKSKSTEPPPPPPLIPDKKAPPPPPPPAKKGPAPPPPPPPAKNGPAPPPAPPMAGNLKSSSKPPPSPAEMSEEDTDKVKLKPLHWDKVTTNVDHSMVWDKLDRGSFRVDQDFLEALFGSVATSKRSSRVENVSSSPSKEASAQSSTIFILDPKKSHNFAIVLKSLAVSRREIVDALEEGQGLSSDIIEKIVRLAPNQEEQSNILQYNGDPARLAVAESFLYDILNAVPSAFKRLNAMHFRFNYDSEVLEIKESLNTLELACKELRKRGLFVKLLEAVLKAGNHMNAGTSRGNAEAFNLSSLRKLKDVKTTDGKSTLLHFVVEGVVRSEGRRCVLNRDWSLSRNGSRKMNGKGESENFVSDEQREMEYLRLGLPFVGGISTEFSNLKKAAIIDYSSLLASISSLSTKIAEMKQLVSQCGNAKGGNFEREMDLFLRNAEEELGLVRDEEKRVMQIVKKTNEYYQGGASKNKAESVVEIFVIVKDFLVMVDQACIDISRNMNQKRKTTKSNSG	870

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr9g01381	870	Gene3D	Formin, FH2 domain	428	859	IPR042201	-
	Accr9g01381	870	MobiDBLite	consensus disorder prediction	42	71	-	-
	Accr9g01381	870	MobiDBLite	consensus disorder prediction	365	414	-	-
	Accr9g01381	870	MobiDBLite	consensus disorder prediction	291	311	-	-
	Accr9g01381	870	MobiDBLite	consensus disorder prediction	42	85	-	-
	Accr9g01381	870	MobiDBLite	consensus disorder prediction	256	275	-	-
	Accr9g01381	870	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	430	870	IPR015425	-
	Accr9g01381	870	MobiDBLite	consensus disorder prediction	233	248	-	-
	Accr9g01381	870	MobiDBLite	consensus disorder prediction	204	221	-	-
	Accr9g01381	870	Pfam	Formin Homology 2 Domain	432	847	IPR015425	-
	Accr9g01381	870	MobiDBLite	consensus disorder prediction	184	275	-	-
	Accr9g01381	870	PANTHER	FORMIN-RELATED	337	858	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Accr9g01381	870	SMART	it6_source	429	862	IPR015425	-
	Accr9g01381	870	MobiDBLite	consensus disorder prediction	330	442	-	-
	Accr9g01381	870	Coils	Coil	607	627	-	-
	Accr9g01381	870	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	506	866	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr9g01381	Accr-Chr9	19660410	19663117	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr9g01381	419	864	FH2 protein (formin) Gene Family	AT1G70140	54.120	3.38e-163	492

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr9g01381	-		-	pcin:129296125	701.819