Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01360 ATGTCTCGCACTTGCTCGCAGTGTGGCAACAATGGCCATAATTCCCGTACTTGTAATCACGGCGGCGGCGGCGGCGGAGGTAGTGGCGGCAGCGGCGGCGGCGGCGATGGTTCATCTAAGGAGAACGGGATCATGCTGTTCGGCGTGCGACTCAGTGAGGGTAACTCTTTTAGGAAAAGCGCTAGTATGACGAATCTGTCACAGCTTGAGGCTCCGGCTCAGGATTCCAACGCCGTCGACGCTGGTTATGTTTCCGACGATGTCGTTCACGCATCCGGACGGACTCGTGAGCGTAAGAGAGGTGTTCCCTGGACGGAGGAAGAGCATAGGCTGTTTCTATTGGGATTACAGAAAGTCGGAAAAGGGGATTGGAGAGGAATTTCTAAGAACTTTGTGAAAACTCGGACGCCGACTCAGGTGGCGAGTCATGCTCAGAAGTACTTCCTTCGTCGCCATAACCAGAATCGGAGGCGTCGTAGATCTAGTCTTTTCGACATTACAACTGATACAGTGATGGAATCCTCTTTAATGGAGGGAGGGCAAGTTCACCAAGAAACGCCAATCCTGCCCACACATCCACAGTTATACTACGGAGGCTTTCCCAGTTCGTCCTTTCCAGCAAAGGTGATGACCGCAGAGAGACCAGCAAAGCCTATTAGGCCGATGCCAATCCTACCAGTACCTCCATCATCGAAAATGGCGAATCTAAATCTAAAAGAGAAAGCTCCGATAGATCCCCTGCCATTATCACTGAAGATGCCAACGTCGACATCAAATGAGCAGTCTCCGGCAAGTAGCCAGTCAGGGTCAACGGACTGTCAGGCGATATCTGGAAAGTTCAGCGGCGGTGGAGACAGCATAATCAGCGTGGCTTAA 876 0.5205 MSRTCSQCGNNGHNSRTCNHGGGGGGGSGGSGGGGDGSSKENGIMLFGVRLSEGNSFRKSASMTNLSQLEAPAQDSNAVDAGYVSDDVVHASGRTRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSLMEGGQVHQETPILPTHPQLYYGGFPSSSFPAKVMTAERPAKPIRPMPILPVPPSSKMANLNLKEKAPIDPLPLSLKMPTSTSNEQSPASSQSGSTDCQAISGKFSGGGDSIISVA 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01360 291 SMART sant 100 150 IPR001005 -
Accr9g01360 291 SUPERFAMILY Homeodomain-like 98 151 IPR009057 -
Accr9g01360 291 MobiDBLite consensus disorder prediction 1 41 - -
Accr9g01360 291 Pfam Myb-like DNA-binding domain 103 148 IPR001005 -
Accr9g01360 291 Gene3D - 102 153 - -
Accr9g01360 291 ProSiteProfiles SANT domain profile. 99 152 IPR017884 -
Accr9g01360 291 FunFam transcription factor MYB1R1 102 153 - -
Accr9g01360 291 CDD SANT 103 148 IPR001005 -
Accr9g01360 291 NCBIfam myb-like DNA-binding domain, SHAQKYF class 99 150 IPR006447 GO:0003677
Accr9g01360 291 PANTHER TRANSCRIPTION FACTOR KUA1 1 253 - -
Accr9g01360 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 152 IPR017930 -
Accr9g01360 291 MobiDBLite consensus disorder prediction 1 18 - -
Accr9g01360 291 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
Accr9g01360 291 MobiDBLite consensus disorder prediction 251 277 - -
Accr9g01360 291 MobiDBLite consensus disorder prediction 246 291 - -
Accr9g01360 291 ProSiteProfiles Myb-like domain profile. 96 148 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01360 Accr-Chr9 19143764 19144829 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr9g01360 Myb_DNA-binding 3.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01360 - - qsa:O6P43_025371 342.043